Shewanella sp. FDAARGOS_354: CEQ32_21690
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Entry
CEQ32_21690 CDS
T04944
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18299
multidrug efflux pump
Organism
shf
Shewanella sp. FDAARGOS_354
Brite
KEGG Orthology (KO) [BR:
shf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shf02000
]
CEQ32_21690
01504 Antimicrobial resistance genes [BR:
shf01504
]
CEQ32_21690
Transporters [BR:
shf02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
CEQ32_21690
Antimicrobial resistance genes [BR:
shf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexEF-OprN [MD:
M00641
]
CEQ32_21690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
ASF17371
LinkDB
All DBs
Position
4834269..4837412
Genome browser
AA seq
1047 aa
AA seq
DB search
MLSQFFIKRPIFAAVLSLLFFITGAIAVWQLPITEYPEVVPPTVVVTANYPGANPKVIAE
TVASPLEQEINGVEDMLYMSSQATSDGRMTLTITFAIGTDVDRAQTQVQSRVDRAMPRLP
QEVQRLGIVTEKSSPDLTMVVHLLSPDNRYDMLYLSNYAALNVKDELARIKGVGAVRLFG
AGEYSLRIWLDPNKVSALGMSPTEIIAAVREQNQQAAAGSLGAQPSGNADFQLLINVKGR
LTELSEFEDIIIKVGQNGEVIRLKDVARVELGATSYALRSLLDNKDAVAIPVFQASGSNA
IQISDDVRAEMARLAKSFPEGLQYEIVYDPTVFVRGSIEAVIKTLLEAVLLVVLVVVLFL
QTWRASIIPLVAVPVSLVGTFAFMHLMGFSLNALSLFGLVLAIGIVVDDAIVVVENVERN
IASGLSPIAATQKAMKEVTGPIVATTLVLAAVFIPTAFMSGLTGQFYKQFALTITISTFI
SAINSLTLSPALSALLLKSHNAPKDGLTRLMDKLFGAWLFTPFNRLFNRASEGYGYVVRK
VIRFGGIIGLVYLGMVALTGVQFVNTPTGYVPGQDKQYLVAFAQLPDAASLERTDAVIKK
MSDIALNHPGVAHSIAFPGLSINGFTNSPNSGVVFVALDDFELRKRPELSANAIAGQLNQ
QFAGIQDAFIAIFPPPPVQGLGTIGGFRLQIQDRANLGYEALYQVTQQVMYKAWADPQLA
GIFSSYQVNVPQLELDIDRTKAKQQAVSLDQIFQTLQTYMGSTYVNDFNRFGRTYQVNMQ
ADEAFRQSPQQISQLKVPNVNGDMIPLGSFINVSQSAGPDRVMHYNGFTTAEINGGPAPG
VSSGQAQAAIEKILAETLPNGMTYEWTELTYQQILAGNTGLLVFPLVILLVFMVLAAQYE
SLSLPLAIILIIPMTLLSALSGVLIYGGDNNIFTQIGLIVLVGLATKNAILIVEFAKEKQ
DHGMEVMESILEAARLRLRPILMTSIAFIMGVVPMVFSTGAGAEMRQAMGVAVFAGMIGV
TLFGLILTPLFYYALAKRARHSTASEV
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcgcagttttttattaaaagaccgatatttgcagccgttctctcgctgctgttt
tttatcacaggggcgattgccgtctggcaattacccattaccgaataccctgaagtggtg
cctccgacggtcgtggtaaccgccaactaccctggcgctaaccctaaagtcatcgccgaa
acggttgcctcgcccttagagcaggaaatcaacggcgtcgaagacatgctgtatatgtca
tcgcaggcgacgtccgatggacgcatgaccttgaccatcacctttgccattggcaccgat
gtggacagagcgcaaacccaagtacagagccgggtagaccgtgctatgccacgtttacca
caggaggttcaacgcctcgggattgtgaccgaaaaatcatcccccgatttaaccatggtg
gtgcatttactgtcgccggataaccgttatgacatgctgtatttgtctaactacgcggcg
ctcaacgtaaaagatgagttagcacgcatcaaaggcgtgggcgcggtgcgtttattcggt
gcgggcgaatatagtctgcggatctggcttgacccgaataaagtctcggcgcttggcatg
tcgccaactgaaattatcgccgccgtacgtgagcaaaatcagcaagcggcagcgggcagt
ttaggggcgcagcctagcggtaatgccgacttccaactcttgattaacgttaaggggcgt
ctgactgaactgtcagaattcgaagacattattatcaaggttggtcaaaacggtgaggtg
atccgtcttaaggatgtggcgcgtgtcgagctcggtgcaactagctatgcgctgcgttca
ttattggataacaaagatgcggtagctattccggtattccaagcatcaggctcaaatgcg
attcaaatctccgacgatgtgcgcgccgaaatggcaagactggcgaagtctttccccgaa
gggctgcaatacgagattgtgtacgatccgaccgtgtttgtgcgtggctcgattgaagct
gtgatcaaaaccttacttgaagccgtgctcttagtggtgttagtggtggtgctgttcctc
cagacttggcgcgcttcgattattccgctggtggccgtgcctgtgtctttggtggggacc
ttcgcctttatgcacttgatgggcttctcgcttaatgcgttatcgctgtttggtctggtg
ctggccatcgggattgtggtggacgatgccatcgtggtggtagaaaacgtcgagcgaaat
atcgcctcggggttaagcccaattgccgcaacgcaaaaggcgatgaaagaagtgactggg
ccgattgtggcaaccaccttagtgttggcggcagtgtttattccgaccgcctttatgagc
ggattaacggggcaattttataagcagtttgcgctaactatcacgatttcgacctttatc
tcggccattaactcgctcaccctgagccccgcgttatcggcactgttactcaagagccat
aatgcgccaaaggatggtttaactcgcctaatggataagttgttcggtgcttggttgttc
acgccttttaaccgcttattcaaccgtgcctcagagggttatggctatgtagtacgtaag
gtgatccgttttggcggtattatcggactggtgtatctgggcatggttgcgcttacgggc
gtgcaatttgtgaatactccaacagggtatgtgcccggccaagataaacagtatttagtg
gcatttgcccaattaccggatgcggcctcactcgaacgtaccgatgcggtgatcaagaaa
atgtccgacatcgccttgaatcaccctggtgtggcgcactcgattgccttccccggtctg
agtatcaacggttttaccaatagtcctaactcgggtgtcgtgtttgttgccctagatgat
tttgagttacgtaagcgtcctgagctgtcggcgaatgcgattgccggccaattaaatcag
caatttgctggtattcaggatgcgtttattgccatcttcccgccgccacctgtgcaaggc
ctcggcactattggagggttccgtctgcaaattcaagacagagccaaccttggttatgag
gccttgtatcaggtgacccaacaagtgatgtataaggcgtgggccgatccacaattagcg
gggattttctctagctatcaagtgaacgtgccacaacttgaactggatatcgatcggact
aaagcgaaacagcaggcagtgtcgctcgatcaaattttccagacattacaaacctatatg
ggctcgacctatgtcaacgacttcaatcgtttcggtcgaacctatcaggtgaatatgcag
gccgacgaagcattccgtcaaagcccgcagcagattagtcagctaaaagtgccgaatgtg
aatggcgatatgatcccacttggctcctttatcaatgtgagccagagtgcggggcccgat
cgtgtgatgcactataacggtttcaccacggctgagattaacggtggcccagcacccggt
gtgagttcgggtcaagcgcaggcggcgattgagaaaatcctcgctgagacgctgccaaac
ggtatgacctacgagtggactgagctgacctatcagcagatcctcgcgggtaacactggc
ttgctcgtgttcccgttggtgatcctgctggtgtttatggtgctggcggcgcagtacgag
agtttgagtttaccattggcgattatcttaattatcccaatgaccttactctcagcgctt
agtggtgtgcttatctatggtggcgataataatattttcacccagattggtcttatcgtc
ctcgtgggcttagcgaccaagaacgcgattctgattgtcgaatttgccaaggaaaaacaa
gaccatggtatggaagtgatggagtcgattcttgaggcggcgcgcttacgtttacgcccc
atcttgatgacctctatcgcctttattatgggcgtggtgcctatggtgttttcgacaggc
gcgggggctgaaatgcgtcaagccatgggcgtggcagtatttgccggcatgattggggtg
acgctgtttggtttgatccttacaccattgttttactatgccttagcaaaacgcgcccgt
catagtacagcatcagaggtctaa
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