Sphingobacterium sp. 21: Sph21_0028
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Entry
Sph21_0028 CDS
T01450
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
shg
Sphingobacterium sp. 21
Pathway
shg01501
beta-Lactam resistance
shg01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
shg00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Sph21_0028
01503 Cationic antimicrobial peptide (CAMP) resistance
Sph21_0028
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shg03036
]
Sph21_0028
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shg02000
]
Sph21_0028
01504 Antimicrobial resistance genes [BR:
shg01504
]
Sph21_0028
Chromosome and associated proteins [BR:
shg03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Sph21_0028
Transporters [BR:
shg02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Sph21_0028
Antimicrobial resistance genes [BR:
shg01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Sph21_0028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND_2
YknX_C
BSH_CzcB
RND-MFP_C
BSH_CusB
Beta-barrel_RND
HH_MFP_RND
BSH_LcnD
Biotin_lipoyl
HH_EMRA
BSH_Fcp1
CzcB_C
Motif
Other DBs
NCBI-ProteinID:
ADZ76621
UniProt:
F4CDX7
LinkDB
All DBs
Position
28408..29466
Genome browser
AA seq
352 aa
AA seq
DB search
MKRKYIYLIIIVGIIAFVAYKFSSEKGGKIAPPSESPKGAPIEVNGIVVSPKDFENILTV
SGSVEPNEQVQIRSEVSGIIRNLYFHEGSFVTKGQILFNIDDTELQAQLLQRQTEEKLAE
ENARRASLLLEKEAISTQEKDVALADLQSAQAQTQLIKAQIAKTKVRAPFSGKIGLRSVS
AGEYLTPTTIVANLMSTNPVKILFSVPEKYTAQIKEGLPLNFTISGSSKQYSAKIYAIEP
GIDAQTRTIQIRALAANDSGELFPGSFARVQLPINMVKEAVLIPTEAVIPVQGGKQVFVC
KGGKASAVDIESDSRTSTDILVNKGISIGDTVLTSGVMALKNGMNVHVNLKN
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaaagtacatttacttaatcattattgtaggtattatcgctttcgttgcctac
aagttttccagtgaaaaaggaggtaaaattgccccacctagtgaaagtccaaaaggtgct
cccattgaagtaaatgggattgtggtatcaccgaaagattttgagaatattttaacggta
tcgggtagcgttgaaccaaacgagcaagttcaaattcggagcgaggtttcaggtattata
cgaaatctttacttccatgaaggatcttttgtaacaaaaggacaaattctgtttaacatt
gacgacacagaattacaagctcaattattgcaacgtcaaaccgaagaaaaacttgcggaa
gagaacgctcgccgagcctccctcttgttagaaaaggaggcgatcagcacgcaagaaaag
gatgtggcactcgcagatttacaatcagctcaggcgcaaacacaattaataaaagcgcag
atagcgaaaacaaaggtaagggcacctttcagtggaaaaataggtcttcgctcggtatcg
gcaggagaatatttgacacccactacgattgtcgcaaatttaatgagtaccaacccggta
aaaattttattttcggttcctgaaaaatatacagcacaaataaaagaagggctgccttta
aactttacgataagcggctcgtcaaagcagtatagcgcaaaaatatatgccatcgaacct
ggaattgatgcacagacaaggacaatacaaattagagctttagctgccaacgattcaggc
gagttatttccaggctctttcgccagggtgcaactacccatcaatatggtaaaagaagcc
gttttaatccccacggaagccgttatcccggtacaaggaggcaagcaagtttttgtatgc
aagggaggcaaggcgagcgcggtggacattgaaagcgatagcagaacaagcacagatatc
ctcgtgaacaagggtatttctatcggtgataccgtgctcacttcgggtgtcatggcctta
aaaaacgggatgaatgtgcatgttaacttaaaaaattaa
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