Sphingobacterium sp. 21: Sph21_0041
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Entry
Sph21_0041 CDS
T01450
Name
(GenBank) Isoleucyl-tRNA synthetase
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
shg
Sphingobacterium sp. 21
Pathway
shg00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
shg00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Sph21_0041
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
shg01007
]
Sph21_0041
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shg03016
]
Sph21_0041
Enzymes [BR:
shg01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
Sph21_0041
Amino acid related enzymes [BR:
shg01007
]
Aminoacyl-tRNA synthetase
Class I (U)
Sph21_0041
Transfer RNA biogenesis [BR:
shg03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Sph21_0041
Prokaryotic type
Other AARSs
Sph21_0041
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
DUF5915
Anticodon_1
tRNA-synt_1g
tRNA-synt_1e
Cas6b_C
Motif
Other DBs
NCBI-ProteinID:
ADZ76634
UniProt:
F4CDZ0
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All DBs
Position
41909..45322
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AA seq
1137 aa
AA seq
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MYKEYKQLDLPNIGNNILANWQAKNVFEKSVTSRPSTKPYTFYEGPPSANGMPGIHHVMA
RTIKDIFCRYKTLKGFQVKRKGGWDTHGLPIELAVEKTLGITKEDIGKKISVEEYNNACK
REVMRYTDVWNDLTEKMGYWVDLKNPYITYQNEYIETIWWILKELYNKDLLYKGYTIQPY
SPAAGTGLSSHELNQPGTYKPVKDTTIVAEFRIVKDQIHPLMPQLFEEEGEDTAIIAWTT
TPWTLPANCALVVGKNITYVKIRTFNPYTFEPISIVLAKDLVGKYFKSEAKDLPFQDYKE
GDKLIPWELATEFKGEDLLNLRYEQLLPYVINDDLQQHAFRVIPGDFVTTEDGTGIVHAA
ATFGADDFRACRENGVPGVLVKDENGKDVPIVDKQGRFVKEITDFAGRFVKEEYYSDEER
QEPDFKPTDVLIAIKLKEENKAFDVKRYEHSYPHCWRTDKPILYYPLDSWFIKTTAVKEK
LVALNKTINWKPEATGTGRFGNWLENLVDWNLSRSRYWGTPLPIWRSEDENEEICIGSIQ
ELREYIEFSLTTNVLNEEESAKLREYLVKLDTDKFDLHRPYVDDIVLVSDSLQKLFREPD
LIDVWFDSGSMPYAQWGLDHEKLAKGEKFPFKEGFEEAYPADFIAEGVDQTRGWFFTLHA
IATMLCDSVAFKNVVSNGLVLDKNGNKMSKRLGNAVDPFATISKYSADATRWYMISNAAP
WDNLKFNEEGLDEVRRKFFGTLYNTYAFFALYANIDGFSYMEAEIAYNDRPEIDRWIISL
LNSLTKEVDTFYQDFEPTKAARAIQNFVDEHLSNWYVRLCRRRFWKGEYSEDKISAYQTL
YTCLDTVAKLMSPIAPFFSDQLFLDLNNATQKDRAESVHLSFYPTYNEALVDKNLEERMT
LAQDISSLTLSLRKKVGINVRQPLNKILLPVLDDTFREKVEKVKDLILSETNIKEIEFIK
DTSGIIRKKIRPNFKALGPKVGKDMKLVAAAIQAFGESEISQLETSGSFTLTEAPYTVTL
ADVEIIAEDVAGWQVANLDKLTVALDVHITPTLKNEGLARELVNRIQTLRKELNFEVTDK
INVTISNSSLIADAIKDNLSYISTEILANSFKVENNLTGGERVEIEETELNVLIEKV
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaggaatataaacagctcgatttaccaaatataggcaacaatatcttagctaat
tggcaggcaaagaatgtgtttgagaaaagtgtcaccagcaggccttctacaaagccctat
actttttatgaaggtcctccctctgccaatggtatgcctggcatacaccacgtcatggct
aggacaataaaggatattttctgccgatataaaaccttaaaaggcttccaggtaaagcgg
aaaggcggatgggatacccatggtcttcccatcgaacttgctgtagaaaaaactttaggt
attactaaagaagatattggtaaaaagatatcagtagaggaatacaataacgcctgtaag
cgcgaagtaatgcgctatacggatgtttggaatgatctgactgaaaaaatgggttattgg
gttgatctcaaaaacccctacattacttatcaaaacgaatacatcgaaaccatttggtgg
atattaaaggaattatacaataaagacctattatacaaaggttatactattcagccatac
tctcctgctgcgggaaccggcctgagctcacatgagctaaatcaacccggcacctataaa
cctgttaaagacacgacaattgtagcagaatttagaatcgtcaaagatcagattcaccca
ttaatgcctcagttgttcgaagaggaaggagaagatacggcaatcatcgcctggactacc
acaccttggactttaccggcaaattgcgcactcgtcgtgggaaaaaatattacctacgta
aagatacggacgtttaatccctatacatttgagccgatcagcattgttttggcaaaagat
ttagttggcaagtatttcaaatcggaggcgaaagatcttcccttccaagattacaaggaa
ggtgacaaactgattccttgggaacttgcaactgaatttaaaggagaagacttgctcaat
ttacgttatgaacaactacttccttatgtcattaatgatgatttacagcaacatgcgttc
cgtgtcatccctggggattttgtgacgaccgaagatggcaccggtatcgtacatgctgct
gctacatttggtgcagacgactttagagcctgtcgtgaaaacggagttcccggagtttta
gtaaaagatgaaaatggcaaagatgttccaattgtagacaaacagggacgattcgtcaaa
gaaattacagatttcgccggacgttttgttaaggaagaatactacagcgacgaagaaagg
caagagccggactttaaaccaacggatgtgttaattgcgatcaagttaaaggaggagaat
aaagcctttgatgtcaaacgatatgaacacagttatccacattgttggcgtaccgacaag
cctatcttgtattatcccttagacagctggtttataaaaaccactgccgttaaggaaaaa
ctcgtggcacttaataaaacgatcaattggaagcctgaagctaccggcacaggacgtttt
ggaaattggctggaaaatctagttgattggaatctatctcgatctaggtattggggcact
cccctgcctatctggcgttcagaagatgaaaatgaagaaatttgtataggatcgatacag
gaattacgtgaatatatcgagtttagtttaactaccaatgtgttaaatgaagaagaaagc
gccaaactacgcgaatatctggtaaaactcgacactgataaatttgatcttcaccgacct
tatgtagacgacattgtgcttgtgtctgatagccttcagaaattgtttagagagcctgac
cttatcgatgtgtggttcgattccggatcaatgccgtatgcacagtgggggttagaccat
gaaaaattagcaaaaggagagaaatttccattcaaagaaggttttgaagaggcgtatcca
gccgactttatagctgagggcgtagaccaaacgcgggggtggttttttacattgcatgcg
atagcaaccatgctttgtgattccgtagcatttaaaaatgtggtttctaacggtctggtg
ctcgataagaatggaaacaaaatgtccaaacgcttaggtaatgcggtagatccttttgcc
accatttcaaaatacagtgccgatgctacccgttggtacatgatcagcaatgctgcacct
tgggataacttaaaattcaatgaagaaggtttagatgaagtgcggcgtaagttcttcgga
acactatacaacacttatgctttctttgcgctatatgccaacattgacggcttctcttac
atggaagcagagatcgcctataatgaccgtcctgaaattgatcgttggatcatatcactc
ttgaatagtttgacaaaagaggtagatacattctatcaagatttcgagccaacaaaagca
gctcgtgccatccaaaatttcgtggatgagcatttaagtaattggtatgtacgactatgt
cgccgccgtttttggaaaggcgaatatagtgaagataaaatctctgcttatcaaacccta
tatacctgcttagacacagttgcgaaactcatgtctccaatcgctccttttttcagtgat
caactatttctggacctcaataacgcaacgcagaaagatcgggcggaatcagttcacctt
tctttctacccgacttataatgaagcgcttgtagacaaaaatctggaagaacggatgacc
ttggcccaagatatatcgtcgttaactttatctctacgtaaaaaagtaggtataaatgtt
cgtcaaccactaaacaaaattctacttccggtgttagatgatacattcagggagaaagta
gagaaagtgaaagatttgattttatcggagacaaacatcaaagaaatagagtttataaag
gatacttccgggattatacgaaaaaaaatcagacctaacttcaaggccttgggacctaag
gttggaaaagatatgaaactggttgcagcagctattcaagcgtttggagagtcggaaatt
agtcaattggaaacatctggatcctttaccttaacggaggctccttatacagttacctta
gcggatgtagaaataatcgcagaagatgtagctggctggcaagttgccaacttagacaag
ctcacggtagctttagatgttcatattacaccgacactaaaaaatgaaggcctggcgcgc
gaacttgtgaatcgcatacaaacacttcgaaaggaacttaactttgaagtaactgataag
atcaatgtgacgataagcaatagttccttaattgccgatgctattaaagataatttatct
tatattagcacagagatcctagccaactcgtttaaagttgaaaacaacttaaccggtgga
gaacgtgttgaaatagaagagactgagctaaatgtattaattgaaaaagtgtag
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