Sphingobacterium sp. 21: Sph21_0060
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Entry
Sph21_0060 CDS
T01450
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
shg
Sphingobacterium sp. 21
Pathway
shg00300
Lysine biosynthesis
shg00550
Peptidoglycan biosynthesis
shg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Sph21_0060
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Sph21_0060
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
shg01011
]
Sph21_0060
Enzymes [BR:
shg01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
Sph21_0060
Peptidoglycan biosynthesis and degradation proteins [BR:
shg01011
]
Precursor biosynthesis
Amino acid ligase
Sph21_0060
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
CbiA
UPF0004
Motif
Other DBs
NCBI-ProteinID:
ADZ76653
UniProt:
F4CEF8
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All DBs
Position
complement(66010..67473)
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AA seq
487 aa
AA seq
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MISLSKILNGVSIKQLIGSMDVTVHAVRFDSRQVVDGDLFVAVRGTLTDGHVFIDKAVAL
GAKIVVCEQLPQDLSGHITYIQVENAGFALGLIAANFYDNPSAKLKLVGVTGTNGKTTVA
TLLYKLFVELGFRVGLISTVQNKVNERVIESTHTTPDPISLNELLCEMVNSGCDYCFMEV
SSHAVAQHRITGLSFVGGVFTNLTHDHLDFHKTFDAYLKAKKAFFDMLPKSAFALVNIDD
KNGSVMLQNTDAYKKTYGLKNIADFKGRIVESHFNGMLMQIDTREVWIRLVGAFNAYNLL
AVYSVAILLEQDTTRVLTILSRLTGAEGRFDTLVSGNGVIGIVDYAHTPDAVENVLRTIV
DLRKNKEQIIAVLGCGGDRDKTKRPEMAAVAANLSDKVILTSDNPRSEDPQQIIREMEAG
IPADKKRHVFSITDRYEAIKAAVHLAQPGDIVLIAGKGHEKYQEVMGEKRPFDDKAILKD
LFKEVND
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgatttcgctatcgaaaatattgaatggtgtatctataaaacagcttataggtagcatg
gatgtgactgttcatgcggtacgttttgattcccgccaagtggtagatggtgatcttttc
gttgctgtcaggggaactcttaccgatggtcatgtatttatagataaagcagttgccctg
ggagctaagatagtggtatgcgagcagctacctcaagaccttagtgggcacattacctat
atacaagttgagaatgcaggctttgcactagggttgatagctgctaacttttatgataac
ccatccgccaaattgaagttagtgggcgtaaccggcacgaacggaaaaacgacggttgcg
acgttactatataaattatttgttgaactcggatttagagttggccttatttcgactgta
caaaataaggtgaacgagcgcgtcattgaatcaacccataccacacctgatccgataagc
ttaaatgagcttttatgtgagatggtaaacagtggttgtgattattgcttcatggaggtt
agctcgcatgcggttgcacagcatcgaattacaggtttgtcctttgttggtggtgttttt
accaacttaacgcatgaccatttggattttcacaaaacttttgatgcctatctaaaagcg
aaaaaggcttttttcgatatgctgcctaagtcggcttttgccttggtgaatatagatgat
aaaaatggaagcgtcatgctccagaataccgacgcttacaaaaagacatacggtttaaag
aatattgccgactttaaagggaggattgtggaaagccatttcaatggtatgctaatgcaa
atcgatacacgtgaagtatggatacgtttagttggtgcgttcaatgcttataatttgttg
gcagtgtatagtgttgccattcttttggaacaggatacgacccgagtgttaacgatttta
agcagattaaccggagcagaaggtagattcgatacgctggtttcgggtaacggtgttatt
ggtatcgtggattatgcgcatacgcctgacgcggtggaaaatgtcttgcgaacgattgta
gatttgcgaaaaaataaggaacaaataatagctgtattaggctgcggcggagatagggat
aagacaaagcgacccgaaatggcggcggtagccgcaaacttaagtgataaggtgatttta
acctcagataacccaagaagcgaagatccgcaacagattattcgcgaaatggaagctggg
atacctgccgataagaaaagacatgtgttttccatcacggatcgctatgaagccatcaaa
gcagctgttcatcttgcacaaccgggtgacattgttctcatagcgggcaagggacatgaa
aaatatcaggaagttatgggggaaaaaagaccttttgacgataaagcaatattaaaggat
ctttttaaagaggtaaacgactaa
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