Shigella sp. PIB: LXH19_02420
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Entry
LXH19_02420 CDS
T10707
Symbol
acrF
Name
(GenBank) multidrug efflux RND transporter permease subunit AcrF
KO
K18142
multidrug efflux pump
Organism
shig Shigella sp. PIB
Module
shig_M00696
Multidrug resistance, efflux pump AcrEF-TolC
Brite
KEGG Orthology (KO) [BR:
shig00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shig02000
]
LXH19_02420 (acrF)
01504 Antimicrobial resistance genes [BR:
shig01504
]
LXH19_02420 (acrF)
Transporters [BR:
shig02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LXH19_02420 (acrF)
Antimicrobial resistance genes [BR:
shig01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
LXH19_02420 (acrF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
MMPL
DUF7338
Motif
Other DBs
NCBI-ProteinID:
USJ82594
LinkDB
All DBs
Position
complement(504678..507782)
Genome browser
AA seq
1034 aa
AA seq
DB search
MANFFIRRPIFAWVLAIILMMAGALAILQLPVAQYPTIAPPAVSVSANYPGADAQTVQDT
VTQVIEQNMNGIDNLMYMSSTSDSAGSVTITLTFQSGTDPDIAQVQVQNKLQLAMPLLPQ
EVQQQGISVEKSSSSYLMVAGFVSDNPGTTQDDISDYVASNVKDTLSRLNGVGDVQLFGA
QYAMRIWLDADLLNKYKLTPVDVINQLKVQNDQIAAGQLGGTPALPGQQLNASIIAQTRL
KNPEEFGKVTLRVNSDGSVVRLKDIARVELGGENYNVIARINGKPAAGLGIKLATGANAL
DTAKAIKAKLAELQPFFPQGMKVLYPYDTTPFVQLSIHEVVKTLFEAIMLVFLVMYLFLQ
NMRATLIPTIAVPVVLLGTFAILAAFGYSINTLTMFGMVLAIGLLVDDAIVVVENVERVM
MEDKLPPKEATEKSMSQIQGALVGIAMVLSAVFIPMAFFGGSTGAIYRQFSITIVSAMAL
SVLVALILTPALCATLLKPVSAEHHENKGGFFGWFNTTFDHSVNHYTNSVGKILGSTGRY
LLIYALIVAGMVVLFLRLPSSFLPEEDQGVFLTMIQLPAGATQERTQKVLDQVTDYYLKN
EKANVESVFTVNGFSFSGQAQNAGMAFVSLKPWEERSGDENSAEAVIHRAKMELGKIRDG
FVIPFNMPAIVELGTATGFDFELIDQAGLGHDALTQARNQLLGMAAQHPASLVSVRPNGL
EDTAQFKLEVEQEKAQALGVSLSDINQTISTALGGTYVNDFIDRGRVKKVYVQADAKFRM
LPEDVDKLYVRSANGEMVPFSAFTTAHWVYGSPRLERYNGLPSMEIQGEAAPGTSSGDAM
ALMENLASQLPAGIGYDWTGMSYQERLSGNQAPALVAISFVVVFLCLAALYESWSIPVSV
MLVVPLGIVGVLLAATLFNQKNDVYFMVGLLTTIGLSAKNAILIVEFAKDLMEKEGKGVV
EATLMAVRMRLRPILMTSLAFILGVLPLAISNGAGSGAQNAVGIGVMGGMVSATLLAIFF
VPVFFVVIRRCFKG
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacttttttattcgacgaccgatatttgcatgggtgctggccattattctgatg
atggcgggcgcactggcgatcctacaattgcccgtcgctcagtatccaaccattgcaccg
cctgcggtttctgtttcagcaaactatccgggcgctgatgcgcagaccgtgcaggatacg
gtgacgcaggttatcgaacagaatatgaacggtatcgataacctgatgtatatgtcctcc
accagcgattccgccggtagcgtgacaattacccttaccttccagtccgggaccgatcca
gatatcgcgcaagtgcaggtgcagaacaaactccagctcgccatgccgttgctgccgcag
gaggttcagcagcaggggatcagtgttgaaaagtccagtagcagctatttgatggtggcg
ggctttgtctctgataacccaggcaccacacaggacgatatatcggactatgtggcctct
aacgttaaagatacgcttagccgtctgaatggcgtcggtgacgtacagcttttcggcgca
cagtatgcgatgcgtatctggttggacgccgatctgctaaacaaatataaactgacgccg
gttgatgtgattaaccagttgaaggtacagaacgatcagatcgctgccggacagttgggc
ggaacgccagcgttaccagggcaacagttgaacgcctcgattattgctcagacgcggtta
aaaaatccggaagaattcggcaaagtgaccttgcgcgtaaacagtgacggctcggtggta
cgcctgaaagatatcgcacgggttgaacttggcggtgaaaactataacgttatcgctcgc
atcaacggtaaaccggcggcgggcctggggattaagctggcaaccggcgcgaatgctctc
gataccgcgaaagccattaaggcaaaactggcggaattacagccattcttcccgcaggga
atgaaggttctctacccttatgacaccacaccattcgtccagctttctattcacgaagtg
gtaaaaacgctgttcgaagccattatgctggtgttcctggtgatgtatctgttcttgcag
aatatgcgagcaacgctgatccccaccattgcggtacccgtggtgttgttagggacgttt
gccatcctcgccgcttttggttactccatcaacacactaacgatgttcgggatggtgctt
gccatcgggctgctcgtcgatgatgcgatagtggtggtggagaacgtcgagcgcgtgatg
atggaggataagctcccgccaaaagaagcgacggaaaaatcaatgtcgcaaatccagggc
gcactggtgggtatcgcgatggtgctgtcagcggtatttattccaatggcattcttcggc
ggttctactggggcaatttaccgccagttctctatcaccatcgtttcggcaatggcgctt
tctgttctggtggcattgattcttaccccagcgttatgtgcaacactgctcaaacccgtc
tctgctgagcatcacgaaaataagggcggtttcttcggctggtttaataccaccttcgat
catagcgttaaccactacaccaacagcgtcggcaaaatcctcggttccacaggacgatat
ttactgatctatgcactaattgttgctggaatggtggtgttgtttttacgtcttccgtct
tccttcttacctgaagaggatcagggtgtctttctgactatgattcagttacccgctggc
gcgacgcaagagcgaacgcaaaaagtgttggatcaagtgacggattactatctgaagaac
gagaaagcgaacgtagaaagtgtctttacggttaacggctttagcttcagcggccaggca
caaaacgccggtatggctttcgtcagtctgaaaccgtgggaagagcgtagtggtgacgaa
aacagtgcggaagcggtaatccatcgtgccaaaatggaattgggcaagatccgcgacggt
tttgtcattccattcaatatgccagccattgttgaactgggcacggcaacgggtttcgac
tttgagttaattgatcaggctgggctgggtcatgatgccctgacccaggcccgtaaccag
ttgcttggcatggcggcgcaacatcctgccagcttagtcagcgtgcgtcctaatggtctg
gaagacaccgcgcagtttaaactggaagttgagcaggaaaaggcgcaggcattaggtgtt
tcactttctgacatcaatcagaccatttcaacggcgttgggtgggacttacgttaacgac
ttcattgaccgtggtcgcgtgaaaaaggtgtatgttcaggcggatgccaaattccgtatg
ctgccagaagatgtcgataaactttatgtccgcagcgccaacggcgaaatggtgccattc
tcggcctttaccactgcacattgggtgtatggctctccgcgactggagcgctacaacggt
ctgccgtcaatggagattcagggggaagccgcgccaggaaccagttccggcgatgccatg
gcgttgatggaaaaccttgcatcacaattaccagctggcattggttatgactggacgggt
atgtcatatcaggaacgcttatcgggaaaccaggctcccgctctggtagcaatttccttt
gtggttgttttcctgtgccttgctgcactctatgaaagctggtcaattcctgtctcggtt
atgttggtcgtgccgttagggattgtcggcgtgctactggcggcgacactctttaatcaa
aaaaatgacgtctactttatggtgggcttgctaacgacaattggcttgtcggctaaaaac
gctattttgattgttgagttcgctaaagatctcatggagaaagagggtaaaggtgttgtt
gaagcgacactgatggcagtacgtatgcgtctgcgtcctatcctgatgacctctctcgcc
tttattctcggcgtattaccgctagctatcagtaacggtgccggcagtggcgcgcagaac
gcagtgggtatcggggtaatgggcgggatggtttctgcaacgttgctggcaatcttcttc
gtgccggtgttctttgtggtgatccgccgttgctttaaaggataa
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