Shigella sp. PIB: LXH19_14330
Help
Entry
LXH19_14330 CDS
T10707
Symbol
rlmC
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
shig Shigella sp. PIB
Brite
KEGG Orthology (KO) [BR:
shig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shig03009
]
LXH19_14330 (rlmC)
Enzymes [BR:
shig01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
LXH19_14330 (rlmC)
Ribosome biogenesis [BR:
shig03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LXH19_14330 (rlmC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Cons_hypoth95
Methyltransf_15
Methyltransf_12
Methyltransf_ANTKMT
Methyltransf_11
Methyltransf_37
Motif
Other DBs
NCBI-ProteinID:
USJ80706
LinkDB
All DBs
Position
complement(3003408..3004535)
Genome browser
AA seq
375 aa
AA seq
DB search
MQCALYDAGRCRSCQWITQPIPEQLSAKTADLKNLLADFPVEEWCAPVSGPEQGFRNKAK
MVVSGSVEKPLLGMLHRDGTPEDLCDCPLYPASFAPVFAALKPFIARAGLTPYNVARKRG
ELKYILLTESQSDGGMMLRFVLRSETKLAQLRKALPWLQEQLPQLKVITVNIQPIHMAIM
EGETEIYLTEQQALAERFNDVPLWIRPQSFFQTNPAVASQLYATARDWVRQLPVKHMWDL
FCGVGGFGLHCATPDMQLTGIEIAPEAIACAKQSAAELGLTRLQFQALDSTQFATAQGEV
PELVLVNPPRRGIGKPLCDYLSTMAPRFIIYSSCNAQTMAKDIRELPGYRIERVQLFDMF
PHTAHYEVLTLLVKQ
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgcgcactttacgacgcgggtcgctgtcgttcctgtcagtggataacgcagccg
attccagagcaactctccgctaaaaccgccgatcttaaaaatctgctcgccgactttccg
gttgaggaatggtgcgcaccggtgtcaggcccggaacaagggtttcgtaataaagccaaa
atggtggtgagtggtagcgttgaaaaaccactgctcggtatgctgcatcgagacggcaca
ccggaagacctttgtgactgcccgctttatcctgcctcatttgcgcccgtttttgcggcg
ctaaaaccgtttatcgcccgagcggggttaacgccttacaacgtggcgcgtaagcgtggc
gaactgaaatacattttgctgactgaaagccagagcgatggcggcatgatgctgcgcttt
gtactgcgttctgaaaccaaactggcgcaactgcgtaaggcgctgccgtggttacaggaa
caactgccgcagctaaaagttattaccgtcaatattcagccgatacatatggcgattatg
gaaggggagacggagatctacctgaccgaacaacaggcgctggcagagcgttttaacgat
gtgccgctgtggatccgtccgcaaagtttcttccagactaatccggcggtcgccagccag
ctgtacgctaccgcgcgcgactgggtacgacaactgccagttaaacatatgtgggatctc
ttctgtggcgtggggggctttggtttacactgcgcgacgcctgacatgcagttaaccggg
atcgaaattgcaccagaggccattgcctgtgcgaagcagtcagccgctgaactgggctta
acgcgtttgcaatttcaggcgctggactccactcagtttgccaccgcccagggggaagtg
cctgagctggtgctggttaacccgccgcgacgtggcattggtaaaccgctatgtgattat
ctctcaacgatggcaccgcgttttatcatctactccagctgtaacgcccaaactatggcg
aaagatatccgcgaactgcctggttatcgcatcgaacgggtacagctttttgatatgttc
ccgcataccgcgcattacgaagtgctgacactgctggtgaagcaataa
DBGET
integrated database retrieval system
