Shinella sp. XGS7: LHJ69_00680
Help
Entry
LHJ69_00680 CDS
T10581
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
shin Shinella sp. XGS7
Pathway
shin01501
beta-Lactam resistance
shin01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
shin00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LHJ69_00680
01503 Cationic antimicrobial peptide (CAMP) resistance
LHJ69_00680
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shin02000
]
LHJ69_00680
01504 Antimicrobial resistance genes [BR:
shin01504
]
LHJ69_00680
Transporters [BR:
shin02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LHJ69_00680
Antimicrobial resistance genes [BR:
shin01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LHJ69_00680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
UDF35648
LinkDB
All DBs
Position
complement(156366..159530)
Genome browser
AA seq
1054 aa
AA seq
DB search
MARFFIDRPIFAWVIALFILVFGGVAITQLPVAQYPTVAPPSLSINVAYPGASAKTLDEA
VISVIEQELNGAPGLAYMESVSQANGTGAITVTFESGTNIDLAQVEVQNRLSRASPRLPA
AVTQQGVRVDKARNNFLLFVILSSKDGSQDPIALGDYAARNIVPEIQRIPGVGQAQLFGT
ERAMRIWLDPAKMLSFGISPAEVNAAIAAQNALVPAGVMGDRPNLSSQTMSATVVVKGQL
ENVEQFGKIVLRANADGSTVRLKDVARLELGGQNYGTYARLNGQPSTGIGVQLSPSGNAL
GTATAVKQRMEELKQYFPASVEYSVPYDSSKFVKISITQVVHTLLEAVGLVFLVMFLFLQ
NIRYTIIPTLVVPVALLGTCAVMLAMGFSINVLTMFAMVLAIGILVDDAIIVVENVERIM
SEEGLPPKEATRKAMKQITGAVIGITLVLASVFIPMGFFPGAVGVIYQQFSLTMVVSILF
SAFLALSLTPALAGSFLKQVPKGHHHTKRGFFGWFNRGFDRSSKGYEGWVAKLLKRSPSM
MVAFLAVVALVGWLYVRMPTSFLPNEDQGYLIVNVQLPPGATTNRTEAAVKTVEDFLRKQ
PEVADTVGVIGFSFSGQGQNAALVFVPLKPWDERHGAEHSAQALAQRTMGAMMFGVRDAF
IFPLSPPPIPELGNATGFALRLQDRAGLGHEALLAARNQLMGMASKSKLITGMRPDGLED
APQLQIDIDRDKAQALGVNFDVLARVLGTQLGSAYVNDFPSSGRMQRVVVQADAVARMTP
EDLLALNVTNTAGKSVPLSAFASTRWITGQMQATRYNGYPSMRLSGDTKPGFSSGDAIAE
MERLAAQLPPGFGYEWTGQSLQEIQSGSQAPILVGLSILLVFLCLAALYESWSIPFAVIL
VVPLGVIGAVIAVTMRDMSNDVYFKVGLIAIIGLSAKNAILIIEFAKELMEDGRSLIDAT
IEACHLRFRPILMTSLAFTLGVLPLAIATGASSGSQRAIGTGVMGGMITATVLAIFFVPI
FFLVVRRIFKGSERQRKMYAHELEANPVRDAEGV
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtttcttcattgatcgccccatcttcgcgtgggtgatcgcgctcttcatcctg
gtgttcggcggggtggccatcacccagctgccggtggcgcaataccccacggtggcgccg
ccctcgctgtccatcaacgtcgcctaccccggcgcctcggccaagaccctggacgaggcc
gtgatctccgtcatcgagcaggagctcaatggcgcgcccggcctggcctatatggaatcg
gtcagccaggccaatggcaccggcgccatcaccgtgactttcgagtccggcaccaatatc
gacctggcccaggtcgaggtgcagaaccgcctctcgcgcgccagcccgcgcctgccggcg
gctgtgacgcagcagggcgtgcgcgtggacaaggcgcgcaacaacttcctgctcttcgtg
atcctgtcgtccaaggacggctcacaggacccgattgcgctgggtgactatgccgcccgc
aatatcgtgcccgagatccagcgcatccccggtgtgggtcaggcccagctcttcggtacc
gagcgcgcgatgcgcatctggctggatccggccaagatgctgtccttcggcatcagcccg
gccgaggtcaatgccgccatcgcggcgcagaacgccctggtgcccgccggtgtgatgggt
gaccgccccaacctctccagccagaccatgtcggccaccgtggtggtcaagggccagctg
gagaacgtggagcagttcggcaagatcgtgctgcgtgccaatgccgacggttccaccgtg
cgcctcaaggatgtggcgcgcctggagctgggtggccagaactacggcacctacgcccgc
ctgaacggccagccctccaccggcatcggtgtgcagctctcgcccagcggcaatgccctg
ggcacggccaccgcggtgaagcagcgcatggaagaactcaagcagtacttcccggccagc
gtcgagtacagcgttccctacgactcctccaagttcgtcaagatctccatcacccaggtg
gtccacacgctgctcgaagccgtcggcctcgtgttcctcgtgatgttcctgttcctgcag
aacatccgctacaccatcatcccgacgctcgtcgttcccgtcgcgctgctcggcacctgt
gccgtcatgctcgccatgggattctcgatcaacgtcctgacgatgttcgccatggtgctc
gccatcggcattctcgtcgacgacgccatcatcgtcgttgaaaacgtcgagcgcatcatg
tcggaagaggggctgccgccgaaggaggcgacccgcaaggcgatgaagcagatcaccggc
gccgtcatcggcatcacgctggtgctcgcctcggtgttcattccgatgggcttcttcccg
ggcgcggtcggcgtcatctaccagcagttctcgctgacgatggtcgtctcgatcctcttc
tcggccttcctcgcgctgtcgctgacgcctgcgcttgccggcagcttcctgaagcaggtt
ccgaagggccatcaccacaccaagcgcggcttcttcggctggttcaaccgcggcttcgac
cgcagctccaagggctatgagggctgggtcgccaagctgctcaagcgcagccccagcatg
atggtggccttccttgccgtggtcgccctcgtgggctggctctatgtgcgcatgcccacc
tccttcctgcctaacgaggaccagggctacctgatcgtcaatgtgcagttgcccccgggc
gccacgaccaaccgcaccgaggccgccgtcaagacggtggaagacttcctgcgcaagcag
cccgaggtggcggacaccgtgggcgtgatcggcttctccttctcgggtcagggccagaac
gccgccctggtgttcgtgccgctcaagccctgggacgagcgccacggcgccgagcacagc
gcccaggcgctggcgcagcgcaccatgggcgccatgatgttcggcgtgcgtgatgccttc
atcttcccgctctcgccgccgcccatccctgagctgggcaatgccaccggcttcgccctg
cgcctgcaggaccgtgcgggtctgggtcacgaggccttgctggccgcgcgcaaccagctc
atgggcatggccagcaagagcaagctgatcacgggcatgcgtccggacggcctggaagat
gcgccgcagctgcagatcgacatcgaccgcgacaaggcccaggccctgggcgtcaacttc
gatgtgctggcccgcgtgctgggcacgcagctgggctcggcctatgtgaacgacttcccg
agcagcggccgcatgcagcgcgtggtggtgcaggccgacgccgtggcccgcatgacgccc
gaggacctgctggccctgaacgtgaccaataccgcgggcaagagcgtgccgctctcggcc
ttcgccagcacgcgctggatcacgggccagatgcaggccacgcgctataacggctatccg
tccatgcgcctcagcggcgacaccaagccgggcttctcctcgggcgatgcgatcgccgag
atggagcggctggccgcccagcttccgccgggcttcggctacgagtggacgggccagtcg
ctgcaggaaatccagtccggttcgcaggcgccgatcctcgtcggcctctcgatcctgctg
gtgttcctgtgccttgcggcgctctatgaaagctggtcgatcccgttcgcggtcatcctc
gtggtgccgctcggcgtcatcggtgcggtcatcgcggtcacgatgcgcgacatgtccaac
gacgtgtacttcaaggtgggcctgatcgcgatcatcggcctttcggcgaagaacgcgatc
ctgatcatcgagttcgccaaggaactgatggaggacggcaggtcgctgatcgatgcgacc
atcgaggcctgccacctgcgcttccgcccgatcctgatgacctcgctcgccttcacgctc
ggcgttctgccgctcgcgatcgcgaccggcgcaagctcgggcagccagcgcgccatcggc
accggcgtcatgggcggcatgatcaccgccacggtgctcgccatcttcttcgtgccgatc
ttcttcctggtggtgcggcgcatcttcaagggcagtgagcgccagcgcaagatgtacgcg
catgagctggaagccaatccggtgcgtgacgccgaaggggtttga
DBGET
integrated database retrieval system
