Shinella sp. XGS7: LHJ69_17465
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Entry
LHJ69_17465 CDS
T10581
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
shin Shinella sp. XGS7
Pathway
shin03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
shin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LHJ69_17465 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shin03400
]
LHJ69_17465 (nth)
Enzymes [BR:
shin01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LHJ69_17465 (nth)
DNA repair and recombination proteins [BR:
shin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LHJ69_17465 (nth)
Prokaryotic type
LHJ69_17465 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
EndIII_4Fe-2S
Ogg-HhH
HHH_8
HHH_5
Motif
Other DBs
NCBI-ProteinID:
UDF37794
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All DBs
Position
3790028..3790684
Genome browser
AA seq
218 aa
AA seq
DB search
MAPMNKTAIEGFFATLKAANPSPQTELEYASVFELLAAVLLSAQATDVGVNKATRRLFPV
ANTPAKILALGEDGLADYIKTIGLYRTKAKNLYKTCQIILEQHGGQVPRSREALEALPGV
GRKTANVVLNVAFGEPTMAVDTHIFRVGNRTGLAPGKNVLEVEQALLRRVPPAYLVDAHH
WLILHGRYICQARRPLCERCQVRAFCDNPAPTMAGNAS
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atcgcgcccatgaacaagaccgcgatcgagggcttcttcgccaccctgaaggccgccaac
ccctccccgcagaccgagctggaatacgccagcgtcttcgagctgctggcggccgtgctg
ctctcggcccaggccaccgatgtgggcgtgaacaaggccacccgtcgccttttccccgta
gccaacacgccggccaagatcctggccctgggcgaagacggtctggcggactacatcaag
accattggcctgtaccgcaccaaggccaagaatctctacaagacctgccagatcatcctg
gagcagcatggcggccaggtaccgcgctcgcgcgaagccctggaagccctgcccggcgtg
ggccgcaagaccgccaatgtggtgctcaatgtggctttcggcgagcccaccatggcggtg
gacacgcacatcttccgcgtgggcaaccgcaccggcctggccccgggcaagaatgtgctg
gaggtggagcaggctctgctgcgccgcgtgccgccggcctatctggtggacgcccaccac
tggctgatcctgcacggccgctacatctgccaggcacgccgaccgctgtgcgagcgctgc
caggtgcgagccttctgcgacaacccggcccctacaatggccggcaatgcctcttga
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