Shinella sp. XGS7: LHJ69_20095
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Entry
LHJ69_20095 CDS
T10581
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
shin Shinella sp. XGS7
Pathway
shin01501
beta-Lactam resistance
shin01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
shin00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LHJ69_20095
01503 Cationic antimicrobial peptide (CAMP) resistance
LHJ69_20095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shin03036
]
LHJ69_20095
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shin02000
]
LHJ69_20095
01504 Antimicrobial resistance genes [BR:
shin01504
]
LHJ69_20095
Chromosome and associated proteins [BR:
shin03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
LHJ69_20095
Transporters [BR:
shin02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LHJ69_20095
Antimicrobial resistance genes [BR:
shin01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LHJ69_20095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
BSH_RND
BSH_CzcB
HH_MFP_RND
YknX_C
BSH_CusB
HH_EMRA
Beta-barrel_RND
RND-MFP_C
HH_AprE
BSH_LcnD
HH_CzcB
Motif
Other DBs
NCBI-ProteinID:
UDF34841
LinkDB
All DBs
Position
complement(4373892..4375052)
Genome browser
AA seq
386 aa
AA seq
DB search
MKKLHSVVAVAAIAGLSVLAWWWQKQPTQAEAASVKGSAAPGGPGAGGQGGPASVEVGRV
QAQSLADEAQAVGTLRARQSVTLRPEVSGRITRLGFSDGQRVRRGQLLVQLDDALQAAQL
QQAEAQAGIARTQLARNRELLAQNFVSPSVVDQAEATLKVAEAQVALAKAQLERLQVRAP
FDGVAGIRLVNLGDYVKDGSDLVSLEDASTMWVDFRLPERYVPRLNLGQDVSVALDALPG
RDFKARIEALDAQLDANGRSMLVRARLQGDTAALRSGLFARVRVVFALRGEALVVPEEAL
VPQGGKQYVVKLVPGAEGKGLMSERIEARLGMRVPGKVELLEGVKAGDLVVTAGQARLMR
GGPQPVKVVDLDKPAAPRPAASAASR
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaactacatagcgtcgtggcggtggcggcgattgccggtctgagtgtgttggcc
tggtggtggcagaaacagcccacccaggctgaggcggcgtcggtcaagggctcggctgcg
ccgggtggtcccggtgcgggcgggcagggcggtccggccagcgtggaagtgggccgggtc
caggcgcagagcctggccgacgaggcccaggccgtgggcaccttgcgcgcgcgccagtcg
gtgacgctgcgccccgaggtcagcggccgcatcacccggctgggcttcagcgacggccag
cgcgtgcgccgcggccagctgctggtgcagctggacgacgccctgcaggccgcccagctg
cagcaggccgaggcccaggccggcattgcccgcacccagctggcccgcaaccgcgagctg
ctggcgcagaacttcgtgtcccccagcgtggtggaccaggccgaggccacgctcaaggtg
gccgaggcccaggtggccctggccaaggcccagctggagcgcctgcaggtgcgcgcgccc
tttgacggcgtggccggcatccgcctggtgaacctgggcgactatgtgaaggacggcagc
gatctggtgagcctggaagatgcctccaccatgtgggtggactttcgcctgcccgagcgt
tatgtgccgcgcctgaacctgggtcaggatgtgtcggtggcgctggacgcgctgccgggc
cgcgacttcaaagcccgcatcgaggccctggacgcgcagctggacgccaatggccgctcc
atgctggttcgagcccgcctgcagggcgataccgcggccttgcgctcgggcctgtttgcc
cgggtgcgcgtggtctttgcgctgcgcggcgaggccctggtcgtgcccgaggaggccctg
gtgccccagggcggcaagcagtatgtggtcaagctggtgcccggcgccgaaggcaagggc
ctgatgtccgagcgcatcgaggcccggctgggcatgcgggtgccgggcaaggtggagctg
ctggagggcgtgaaggccggtgatctggtggtcacggccggccaggcccgcctgatgcgc
ggtggtccgcagccggtcaaggtggtggacctggacaagccggcggcgcccaggcccgcg
gcctcggccgccagccgctga
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