Shinella sp. XGS7: LHJ69_22710
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Entry
LHJ69_22710 CDS
T10581
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
shin Shinella sp. XGS7
Pathway
shin00300
Lysine biosynthesis
shin00550
Peptidoglycan biosynthesis
shin01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shin00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LHJ69_22710
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LHJ69_22710
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
shin01011
]
LHJ69_22710
Enzymes [BR:
shin01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
LHJ69_22710
Peptidoglycan biosynthesis and degradation proteins [BR:
shin01011
]
Precursor biosynthesis
Amino acid ligase
LHJ69_22710
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
GGDEF_2
RraA-like
Motif
Other DBs
NCBI-ProteinID:
UDF35329
LinkDB
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Position
complement(4954731..4956221)
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AA seq
496 aa
AA seq
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MPLMRLKSPEAAARWLREWTTGTLRTDSRLVAPGDAFIAWPGHAQDGRRYVQAALDAGAA
TCLVELEGVDAFGFNDGRVAALPALKAVTGRIAAEYFEQPTRERLQVIATTGTNGKTSTA
WWTAQLLSLLGRRCGVVGTLGIGEPPLREQPAAITYTGLTTPDPVQLQAGFRRMADAGFA
ACAIEASSIGIVEQRLAGTEIKVALFTNFTQDHLDYHGDMGAYWAAKRRLFDWPGLQAAV
LNLDDPKGAPLAAELQGRLDVWTYAVEGAARLSAHGLHYQAGGLCFELREGEQALAVRTG
LIGEYNVANLLAVIGGLRALGLPLDAIVAAVPEITPVPGRMQRVGEGRGQPQAVVDYAHT
PDALEKALAALRPLAAARGGRLVCVFGCGGNRDPGKRPLMGAIAGRLADRVILTSDNPRH
EAPQAILAQIAAGVGGPCEQIEDRQAAIAQAVAQAEPGDVLLIAGKGHEDYQEIAGVRRP
FSDVDQALAALALRKD
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgatgcgcctgaaatccccggaggccgcggcccgctggctgcgtgaatggacc
accggcaccctgcgcaccgacagccgtctggtggcgcccggtgacgccttcatcgcttgg
cctggtcatgcccaggacggccgccgctatgtgcaggccgcgctggatgccggcgccgcc
acctgcctggtggagctggaaggcgtcgatgccttcggcttcaacgacggccgcgtggcc
gcgctgcccgcgctcaaggccgtgaccggccgcatcgccgccgagtatttcgagcagccc
acgcgcgagcgcctgcaggtcatcgccaccaccggcaccaatggcaagaccagcaccgcc
tggtggaccgcccagctgctgagcctgctgggccggcgctgcggcgtggtgggcaccctg
ggcattggcgagccgccgctgcgcgagcagcccgccgccatcacctacaccggcctgacc
acgcccgacccggtgcagctgcaggcgggctttcgccgcatggcggatgcgggctttgcc
gcctgcgccatcgaggccagctccatcggcatcgtcgagcagcgcctggccggcaccgag
atcaaggtggccctgtttaccaatttcacgcaggaccacctggactaccacggcgatatg
ggcgcctactgggcagccaagcgccgcctgttcgactggccgggcctgcaggccgcagtg
ctgaatctggatgaccccaagggcgcgcccctggccgccgagctgcagggccgcctggac
gtgtggacctatgcggtggagggcgcagcccggctctcggcccacggcctgcactaccag
gccggcggcctgtgcttcgagctgcgcgagggcgagcaggccctggcggtgcgcaccggc
ctgatcggcgagtacaacgtggccaatctgctggccgtgatcggcggcctgcgggctctc
ggcctgccgctggacgccatcgtggccgccgtgcccgagatcacgcccgtgccggggcgc
atgcagcgcgtgggcgagggccggggccagccccaggccgtggtggactatgcccacacg
cccgatgcgctggagaaggccctggccgcgctccgccccctggccgcggcgcgtggcggc
cgtctggtctgcgtcttcggctgcggcggcaaccgcgatcccggcaagcgtccgctgatg
ggcgccatcgccggccgcctggccgatcgcgtgattctcaccagcgacaacccgcgccac
gaggcgccgcaggccatcctggcccagatcgcggccggcgtgggcgggccctgcgagcag
atcgaggaccgccaggccgccatcgcccaggccgtggcccaggccgagccgggcgatgtg
ctgctgatcgccggcaagggccatgaggactatcaggagatcgcgggcgtgcgccgcccc
ttctccgacgtggaccaggccctggcggccctggccctgaggaaggattga
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