KEGG   Salvia hispanica (chia): 125186477
Entry
125186477         CDS       T09851                                 
Name
(RefSeq) GTP-binding nuclear protein Ran-3-like
  KO
K07936  GTP-binding nuclear protein Ran
Organism
shis  Salvia hispanica (chia)
Pathway
shis03008  Ribosome biogenesis in eukaryotes
shis03013  Nucleocytoplasmic transport
shis03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:shis00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    125186477
   03008 Ribosome biogenesis in eukaryotes
    125186477
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    125186477
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:shis03019]
    125186477
   03009 Ribosome biogenesis [BR:shis03009]
    125186477
   03016 Transfer RNA biogenesis [BR:shis03016]
    125186477
   03036 Chromosome and associated proteins [BR:shis03036]
    125186477
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:shis04147]
    125186477
   04031 GTP-binding proteins [BR:shis04031]
    125186477
Messenger RNA biogenesis [BR:shis03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     125186477
Ribosome biogenesis [BR:shis03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    125186477
  Pre-60S particles
    125186477
Transfer RNA biogenesis [BR:shis03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    125186477
Chromosome and associated proteins [BR:shis03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     125186477
   Spindle formation proteins
    125186477
Exosome [BR:shis04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   125186477
GTP-binding proteins [BR:shis04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    125186477
SSDB
Motif
Pfam: Ras Roc Arf RNA_helicase MMR_HSR1 GTP_EFTU Pox_A32 ATPase AAA_24 ArgoMid Septin AAA_7 AAA_22
Other DBs
NCBI-GeneID: 125186477
NCBI-ProteinID: XP_047938804
LinkDB
Position
5:complement(40655882..40657999)
AA seq 221 aa
MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDLTLHFV
ESPALAPPEVQIDLIAQKQHEDELNQAATLPLPDDDDDAFD
NT seq 666 nt   +upstreamnt  +downstreamnt
atggcgttgccgaatcagcagactgtggattaccctagcttcaagcttgtcattgttgga
gatggcggaaccggaaaaactacatttgtgaagaggcatctcactggtgaattcgagaag
aaatatgaaccaactattggtgttgaggttcatccattggatttcttcaccaactgtggg
aaaatccgtttttattgctgggacactgccggacaagagaaatttggtgggcttagggat
ggatattacatccatggacaatgcgccatcattatgtttgacgtgacggctcggttgacc
tacaagaatgttccaacgtggcaccgtgatctctgccgtgtctgtgaaaatatcccgatc
gtgctgtgtgggaacaaagttgatgtcaagaacaggcaggtcaaagcaaagcaagttaca
ttccacaggaagaagaatttgcagtactatgaaatctcagcaaagagtaactacaacttc
gagaagcctttcttgtaccttgcccggaagctcgctggtgatcttaccctgcactttgtc
gagtccccggccctagctcctcctgaagttcaaattgatttgattgcgcagaaacagcat
gaagatgagcttaatcaggcggccacccttcctcttcccgatgatgatgatgatgcattc
gactaa

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