KEGG   Salvia hispanica (chia): 125189184
Entry
125189184         CDS       T09851                                 
Name
(RefSeq) DNA repair protein RAD16
  KO
K15083  DNA repair protein RAD16
Organism
shis  Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:shis00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:shis03400]
    125189184
DNA repair and recombination proteins [BR:shis03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     NER4 complex
      125189184
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C zf-C3HC4_2 zf-C3HC4_3 zf-C3HC4 zf-RING_5 DEAD zf-RING_2 Prok-RING_4 zf-RING_UBOX ResIII zf-rbx1 zf-RING_Vps41 zf_RING_Vps8_fungal zf-RING_4
Other DBs
NCBI-GeneID: 125189184
NCBI-ProteinID: XP_047942398
LinkDB
Position
5:complement(861743..869340)
AA seq 893 aa
MRLRSHADGASSSKGKRKPKYRDGSDAEDYGVDPSSDSDFDVPSDDGEDLLDALDNSTAM
FNLNYISDEDGVAKRRKTNSYGKSASSKKVEEESERCSDADIETGTGIDLEKIEYASGIA
EKFLTKRKGKKKKDRPILMWEVLEEENDRWIEENLQMDMDLMNQNEISMETAEPSEDLII
PLLRYQKEWLAWALKQEESSARGGILADEMGMGKTLQAIALVLFKRSISAGIPDAYVPSS
SGSSSKELPQIKGTLVICPLVAVMQWVREIDRFTADGSTKVLVYHGANRAKNLYQLSDYD
FVITTYAIVEAEYRKYVMPPKDKCQYCGKLFYEHKLKIHLKYMCGPGAVRTVKQAKQQRK
EPKGKKMPDLEINTRELNKGNKNGIGCKEMENDDSVDNSDMATSKGKSILHCAAWERIVL
DEAHCIKERRSNTTRAVLALQSRYKWALSGTPLQNRVGELYSLIRFLQIVPYSYYFCKDC
DCRTLDYSTAECPGCEHKNVRHFCWWNRYVSTPIQDSGRKGGGRGAMILLKHKILKSLVL
RRTKKGRAADLALPPRIVTLRRDSLDVVEEDYYTALYNESQAQFNTYVDAGTLMNNYAHI
FDLLTRLRQAVDHPYLVEYSLTSMERKGKAVDTGSDVKCGLCNDTEEDTVVTSCGHTFCK
PCLIDFSASMGQNSCPTCSKPLTVDFTANKAGKEPRSKTTVKGFRPSSILNRIRLDDFQT
STKIDALREEIRFMVERDGSAKAIVFSQFSSFLDLIHYALQKSGVQCVQLDGSMSMGARD
TAIKKFTEDPSCRVFLMSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQFK
PIRIVRFIIENTVEERILKLQEKKELVFEGTVGGCSEALAKLTEADLRFLFVT
NT seq 2682 nt   +upstreamnt  +downstreamnt
atgaggcttcgctctcacgccgatggcgcttcttcttccaaagggaagcggaaaccgaag
tacagagacggttctgatgcggaagattatggagtggacccgtcctccgattctgatttt
gacgttccgagtgatgatggtgaagatctgcttgatgcacttgataacagtacggcaatg
ttcaatttgaactatataagtgatgaggatggtgtcgcgaagaggaggaaaacgaactcc
tatgggaaaagcgcaagtagtaaaaaagttgaagaggagagtgagagatgctcagatgca
gacattgagactggtactggcatcgatctagagaaaatcgaatacgctagtggaatagct
gagaaatttctcacgaaaaggaagggaaagaagaaaaaagataggcctatactaatgtgg
gaagtattagaagaagaaaatgatagatggattgaagagaatttacaaatggatatggac
ctgatgaatcagaatgagatatcaatggaaactgctgagccttcagaggacttgataata
ccactactaagataccagaaggagtggttagcttgggctttgaaacaagaggaatcttct
gcccgaggtggcatccttgccgatgagatgggaatgggcaagactctccaggcaatagca
ctcgttctttttaaaagaagcatctcagcaggaattcctgatgcttacgtaccctcatct
tcaggcagttcctcaaaggagttgccacaaataaagggcacacttgttatatgtcccctg
gttgctgtgatgcagtgggttagagagattgatcgattcactgccgatggaagcaccaaa
gtccttgtctatcatggtgccaaccgagcaaaaaatctttatcagctttcagattatgat
tttgttataacaacatatgcaattgttgaggcagaatacagaaaatatgtgatgcctcct
aaagacaaatgccagtattgtggaaaattgttttatgagcataagttgaaaattcacttg
aaatatatgtgcggacctggtgctgttcggactgttaagcaggcaaagcagcaaagaaag
gaaccaaagggcaagaaaatgccggatctcgagattaatacaagggagctaaacaaaggg
aacaaaaatggcattggttgcaaggaaatggaaaatgatgattcagttgataattcagat
atggccacatccaagggaaaatctattctgcactgtgcggcttgggaacgtattgtgttg
gatgaggctcattgtattaaagaaagacgtagcaatacgactagagctgttcttgctcta
caatctagatacaagtgggctttaagtggtactcctcttcagaatcgtgtgggcgagctc
tactcacttattcgctttctccagatagttccttactcgtattatttctgcaaggattgc
gattgtcgtacgcttgattacagtacagcagaatgcccaggatgtgagcataaaaatgtt
cggcacttttgctggtggaatagatatgtttctacaccaattcaagattctggcaggaag
ggaggtggtagaggtgctatgattttgttaaaacacaaaatcctgaaaagcttagtgtta
agacgtacaaaaaagggtagagcagctgatcttgcgctaccccctagaattgttacattg
agaagagattctctcgatgttgttgaagaagactattatacagctctctacaacgagagt
caagcgcagtttaatacatacgtcgatgcaggaacgctgatgaataactatgcccacata
tttgatctactgacacgccttcgtcaggcagttgatcatccctacctcgtggaatattct
cttacttcaatggaaagaaagggcaaagcagttgatactggaagtgatgtgaaatgtggc
ttgtgtaatgacaccgaagaagacacagtggtcacatcatgtgggcataccttctgcaaa
ccctgtttgatcgattttagtgctagcatgggacaaaactcttgccctacttgttcaaag
ccacttactgttgatttcaccgccaacaaagctgggaaagaaccaaggtcaaaaacaact
gtcaaaggattcagaccatcaagtattttgaatagaatccggcttgatgattttcagaca
agtacaaaaattgatgctttgagggaagaaattcgatttatggttgaaagggatggttca
gccaaggcaattgtcttcagccagttctcgtctttcttggatctcatacactatgccctt
caaaagtctggagtgcagtgtgtccagttagatgggtccatgtcaatgggagctagagat
actgctataaaaaagtttactgaggatcctagttgcagagtctttctgatgagcttaaaa
gcagggggtgtcgccctcaatctcacggtagcatcacatgttttcttgatggatccatgg
tggaatcctgctgtggagcggcaggcgcaagacagaattcatcgaattggccaattcaaa
ccaataaggattgtgaggtttattattgaaaacaccgtggaggaaaggattttaaagttg
caggagaagaaggaattagtattcgagggcacggtgggtggatgttcggaggcactggcc
aaattaacagaagctgatctgagattcctgtttgtgacttga

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