Salvia hispanica (chia): 125190165
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Entry
125190165 CDS
T09851
Name
(RefSeq) small nuclear ribonucleoprotein-associated protein B-like
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
shis
Salvia hispanica (chia)
Pathway
shis03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125190165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shis03019
]
125190165
03041 Spliceosome [BR:
shis03041
]
125190165
03032 DNA replication proteins [BR:
shis03032
]
125190165
Messenger RNA biogenesis [BR:
shis03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
125190165
Spliceosome [BR:
shis03041
]
Complex A
U1 snRNP components
Sm proteins
125190165
U2 snRNP components
125190165
Complex B
U1 snRNP components
125190165
U4/U6.U5 tri-snRNP components
125190165
Complex C
U2 snRNP components
125190165
DNA replication proteins [BR:
shis03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
125190165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
125190165
NCBI-ProteinID:
XP_047943333
LinkDB
All DBs
Position
5:40860708..40863314
Genome browser
AA seq
277 aa
AA seq
DB search
MSMSKSSKMLQYINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPTKGSKEE
REDRRTLGLVLLRGEEVISLTVEGPPPPDDSRLKTASATAVSGPGIGRAAGRGVVTGPLS
QAQPGLAGPVRGVGGPAPGMMQPQISRPPQISVPPMPYPQQPPVVRPPSVAPPQGGFPPR
PGMPMPPPPQFRPGGPPPAGFGPPPQYGQRPQMMPPPQMMRGPPPPGGPPRPGMPGGPPP
GQQPPRPGMAPPPPPGGQGHMFRPGMPPPNAPHNQQQ
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcgaagagctccaagatgctgcagtacatcaactaccggatgcgcgtcacc
atccaggacggccgccagctcatcggaaaattcatggccttcgaccgccacatgaatctc
gtcctcggcgattgcgaggagttccgcaagctgcccccgaccaaaggatccaaggaggag
cgcgaggaccgccgcaccctcggcctcgtcctcctccgcggcgaggaggtcatctccctc
accgtcgagggcccccctccccccgacgactcccgcctcaaaaccgcctccgccaccgcc
gtctccggtcccggaatcggccgcgcagccggccgcggcgtcgtcaccggcccgctctcc
caggcccagcccggtctagccggccccgtccgcggcgtcggcggcccggctcccggcatg
atgcagcctcagatttcccggccgcctcagatttcagttccaccgatgccgtacccgcag
cagccgccggtggttaggcctccgtccgtcgcgcctccgcagggagggttcccgccgagg
ccagggatgcctatgccgcctccgccgcagttcaggcccggtggtccgcctccagctgga
tttggtcctcctccgcagtatgggcagaggccgcagatgatgccgccgcctcagatgatg
aggggtccgcctccgcctggtggccccccaaggcctggaatgcccggtggtcctccgcct
gggcagcagccgccgaggcctggtatggcccctccgccacctcccggtgggcaagggcat
atgtttaggccgggaatgccgccaccgaacgcccctcataatcagcaacagtaa
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