Salvia hispanica (chia): 125192207
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Entry
125192207 CDS
T09851
Name
(RefSeq) RING-box protein 1a-like
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis03420
Nucleotide excision repair
shis04120
Ubiquitin mediated proteolysis
shis04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125192207
04120 Ubiquitin mediated proteolysis
125192207
09124 Replication and repair
03420 Nucleotide excision repair
125192207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shis04121
]
125192207
03400 DNA repair and recombination proteins [BR:
shis03400
]
125192207
Enzymes [BR:
shis01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
125192207
Ubiquitin system [BR:
shis04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
125192207
Multi subunit type E3
SCF complex
Ring finger protein
125192207
Cul2 complex
125192207
Cul3 complex
125192207
Cul4 complex
125192207
Cul7 complex
125192207
Cul8 complex
125192207
Cul9 complex
125192207
DNA repair and recombination proteins [BR:
shis03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
125192207
TCR (transcription coupled repair) factors
Cul4-CSA complex
125192207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
125192207
NCBI-ProteinID:
XP_047945679
LinkDB
All DBs
Position
6:1950161..1952647
Genome browser
AA seq
122 aa
AA seq
DB search
MSTLDTDVNMVPAGEGSSGAGPSTTTPHSCKKSKKFEIKKWNAVSLWAWDIVVDNCAICR
NHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKY
GH
NT seq
369 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacactcgacaccgacgtcaacatggttccggccggagagggctcatccggcgcc
ggcccttccactaccacgccgcactcctgcaagaaatcgaagaaattcgagattaaaaag
tggaacgccgtctcgctttgggcttgggatatcgtggtcgataattgtgctatttgcagg
aaccacatcatggatctatgcattgagtgccaggctaatcaagctagtgcgacgagcgag
gaatgcacggttgcttggggggtttgcaaccatgctttccacttccattgcatcagcagg
tggcttaagactcgccaagtttgtcctcttgacaacagcgagtgggagtttcagaagtat
ggtcactag
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