KEGG   Salvia hispanica (chia): 125192207
Entry
125192207         CDS       T09851                                 
Name
(RefSeq) RING-box protein 1a-like
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
shis  Salvia hispanica (chia)
Pathway
shis03420  Nucleotide excision repair
shis04120  Ubiquitin mediated proteolysis
shis04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:shis00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    125192207
   04120 Ubiquitin mediated proteolysis
    125192207
  09124 Replication and repair
   03420 Nucleotide excision repair
    125192207
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:shis04121]
    125192207
   03400 DNA repair and recombination proteins [BR:shis03400]
    125192207
Enzymes [BR:shis01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     125192207
Ubiquitin system [BR:shis04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   125192207
  Multi subunit type E3
   SCF complex
    Ring finger protein
     125192207
   Cul2 complex
     125192207
   Cul3 complex
     125192207
   Cul4 complex
     125192207
   Cul7 complex
     125192207
   Cul8 complex
     125192207
   Cul9 complex
     125192207
DNA repair and recombination proteins [BR:shis03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      125192207
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      125192207
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 125192207
NCBI-ProteinID: XP_047945679
LinkDB
Position
6:1950161..1952647
AA seq 122 aa
MSTLDTDVNMVPAGEGSSGAGPSTTTPHSCKKSKKFEIKKWNAVSLWAWDIVVDNCAICR
NHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKY
GH
NT seq 369 nt   +upstreamnt  +downstreamnt
atgtcgacactcgacaccgacgtcaacatggttccggccggagagggctcatccggcgcc
ggcccttccactaccacgccgcactcctgcaagaaatcgaagaaattcgagattaaaaag
tggaacgccgtctcgctttgggcttgggatatcgtggtcgataattgtgctatttgcagg
aaccacatcatggatctatgcattgagtgccaggctaatcaagctagtgcgacgagcgag
gaatgcacggttgcttggggggtttgcaaccatgctttccacttccattgcatcagcagg
tggcttaagactcgccaagtttgtcctcttgacaacagcgagtgggagtttcagaagtat
ggtcactag

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