Salvia hispanica (chia): 125196821
Help
Entry
125196821 CDS
T09851
Name
(RefSeq) ATP-dependent helicase rhp16-like
KO
K15083
DNA repair protein RAD16
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shis03400
]
125196821
DNA repair and recombination proteins [BR:
shis03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
125196821
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
125196821
NCBI-ProteinID:
XP_047951418
LinkDB
All DBs
Position
6:complement(48151393..48157059)
Genome browser
AA seq
779 aa
AA seq
DB search
MKLRSHGDGASSSKGKEKINYRESSDSEDEEAPPSGEGTSDSDGVPKRRKTESYAKRGSQ
SSKKAEEEESRDADTEIAGDIAEESGGKQKGREKKHRPMLLWKKIEQENNRWIEENYQRD
FDQVNQNEILMETVKPSDDLIIPLLRYQKEWLAWALKQEESSAQGGILADEMGMGKTLQA
IALVLLKRSISTGSSPRESSKIKGTLVICPDVAVKPWAREIDWFTSKGSTKVFVYHGADG
GKFFYQLSDYDFVITTYGVVEKEYRNYVMTPKEECWGCGKILYVDKLKGHLRSCKWPWAA
KPNTEVHRKNVSGRKEVENDNSIESSDATGRTSSEGKHILHCLVWERIVLDEAHCIKARY
GTMKRAVLALKSRYKWALSGTPLENHVDELYYIIRFLQIVPFSYYCCKDCDCNCNTLDRS
SAECTGCGHKNARHFCWWKRYVSKPIQNRRGDPVANSGAMILLKHKILKSIMLRRTKEGR
AADLVLPSRIVTLKKYSLDADEKDYYTALYNETQEQFNKYVHAGTLMLMNNYIHIMTLLT
RLRQALDHRYLLEYSPASMERKGKAIEFTTNNDGIKQKSKMTIKGFRPSSILNTIQIMGV
QDFETSTKIEALKEEIRNMFERDGSAKAIVFSQFSPFLDFIHYALQKSGVNCAHLNGSTA
MEARDTAMKNFTEDPSCRVILMSSKARGVALNLTVASHLFIMDPWWNPVMERQVQDRIHQ
IGQYKPIRIVKFIIENTIEERVLKLREQKELLIDDGVLDGSLLALERLTANDLIFLFAP
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgaagctccgctctcacggcgatggcgcttcttcttccaaggggaaagagaagatcaac
tacagagagagttctgattcggaagatgaagaagcgccgccgagtggtgaaggtactagt
gattctgatggtgtcccgaagagaaggaaaactgagtcctatgcaaaaaggggaagtcag
agtagtaaaaaagctgaggaggaagagagtcgggatgcagatactgagattgctggtgac
atagctgaggaatctggtgggaaacagaagggtagggagaaaaaacataggccaatgtta
ttgtggaaaaaaatagaacaagaaaataatagatggattgaagagaactaccaaagagat
ttcgaccaggtgaatcagaatgagatactgatggaaactgtcaagccttcagatgacttg
ataattccactgctaagatatcagaaggagtggttagcttgggctttgaagcaagaggaa
tcttctgcccaaggtggcatccttgccgacgagatgggaatgggcaagactctccaggca
atagcgctcgttcttctcaaaagaagtatctcgacaggaagttcaccaagggaatcatcg
aaaataaagggtacacttgttatatgtcccgatgttgctgtcaagccgtgggctagagag
atagattggttcacttcaaaaggaagcaccaaagtttttgtctatcatggggccgacgga
ggaaaatttttttatcagctttcggattatgattttgttataacgacatatggagttgtt
gagaaggaatatagaaattatgtgatgactcctaaagaagaatgctggggttgtggaaaa
atcttatatgtggataagttgaaaggtcacttgagatcttgtaaatggccttgggctgct
aagccgaatactgaggttcatagaaaaaatgtcagtggtcgcaaggaagtggaaaatgac
aattcaattgagagttcagatgcgactggccgaacctcatccgagggaaagcatattttg
cattgtttggtttgggaacgtattgtattggatgaggctcattgtatcaaagcaagatat
ggtactatgaaaagagctgtcctagctctaaaatctagatataaatgggctttaagtggt
actcccctagagaatcatgtggacgagctctactacattattcgctttctccagatagtt
cctttctcgtattattgctgcaaggattgcgattgcaattgcaatacgcttgatcgcagt
tctgcagaatgcactggatgtgggcataaaaatgctcggcacttctgctggtggaagaga
tatgtttctaagccgatacaaaatcgtcgtggtgatccggtggccaatagtggtgctatg
attttgttaaagcacaaaatcttgaaaagcataatgttaaggcgcacaaaagagggcaga
gcagctgatcttgtactaccttctagaattgttaccttgaaaaaatattcactcgatgct
gatgaaaaagactattatacagcactctacaatgaaactcaagaacaatttaataaatac
gtccatgcaggaacattgatgttgatgaataactatatccacataatgactctactgaca
cgcctacgtcaggcacttgatcatcggtaccttttggaatattctcctgcttcaatggaa
agaaagggcaaagcaattgaattcaccaccaacaatgatgggataaagcaaaagtcaaaa
atgaccattaaaggattcagaccatcaagtattttaaatacaattcagattatgggtgtt
caggattttgagacaagtaccaaaattgaagccttgaaggaagaaattcgaaatatgttt
gaaagggatggttctgccaaggcaattgtcttcagtcagttctcgcctttcctggatttc
atacactatgcccttcaaaagtctggagtgaactgcgctcatttaaacgggtcaacggcc
atggaagctagagatactgctatgaaaaattttaccgaggatcctagctgcagagtgatt
ttaatgagttcaaaagcacggggtgttgccctcaatctcacagtagcttcacatttgttc
attatggatccgtggtggaatcctgtcatggagcggcaggtacaagacagaattcatcaa
ataggccaatacaaaccaatccggattgtgaagtttattattgaaaacaccattgaggaa
agagttttaaagttgcgggagcagaaggaattgttaatcgatgatggtgttctggatgga
tcgttgttggctctggaaagattaacagcaaatgatctgatattcctgtttgctccctaa
DBGET
integrated database retrieval system
