Salvia hispanica (chia): 125197377
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Entry
125197377 CDS
T09851
Name
(RefSeq) lycopene epsilon cyclase, chloroplastic-like
KO
K06444
lycopene epsilon-cyclase [EC:
5.5.1.18
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis00906
Carotenoid biosynthesis
shis01100
Metabolic pathways
shis01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
125197377
Enzymes [BR:
shis01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.18 lycopene epsilon-cyclase
125197377
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Motif
Pfam:
Lycopene_cycl
DAO
Pyr_redox_2
HI0933_like
GIDA
FAD_binding_2
FAD_oxidored
Pyr_redox_3
Motif
Other DBs
NCBI-GeneID:
125197377
NCBI-ProteinID:
XP_047952067
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Position
6:30002887..30006017
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AA seq
526 aa
AA seq
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MESLAGRNLAAMAISIHPTKRCWRKMNQVGLFGNAHAHGSTSFLVRCDGCVAVPVREDFA
DEEDYVKAGGSELLFVQMQQNKSMDHQSKLADKLSRIQTGGDNNVLDLVVIGCGPAGLAL
AAESAKLGLNVGLIGPDLPFTNNYGVWEDEFKDLGLECCIEHVWRDTIVYLDDNPIYIGR
AYGRVSRLLLHEELLKRCVESGVSYLNTKVERIIEASGGHRLVECEGNIVIPCRLATVAS
GAASGKLLEYEVGGPRVSVQTAYGIEVEVENNPYDPSLMVFMDYRDYWKHKVDYLEAQYP
TFLYAMPMSPTRVFFEETCLASKDAMPFDLLKNKLMSRLETMGIRILQTYEEEWSYIPVG
GSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPQYASVIANILRQDHVKNMFASSRI
SENISMQAWNALWPQERKRQRAFFLFGLALILQLDIEGIRTFFHSFFRLPKWMSQGFLGS
TLSSGDLLLFALYMFVIAPNDMRKSLINHLISDPTGGIMVKTYLTL
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggagagtttagcaggcagaaacttggcagcaatggcgatctcaattcacccaaccaag
aggtgttggaggaagatgaaccaagtaggcttgtttggaaatgcccatgcccatggatca
acctcattccttgtccgctgcgacggctgtgtggcggtgccggtgagagaggattttgcg
gacgaggaggactacgtaaaggcgggagggtcggagctgttgttcgtgcaaatgcagcag
aacaagagcatggatcaccagtctaagcttgctgataagttgtcaagaatacagactgga
ggagataataatgtactggatttggtggtaatcggttgcggaccagcagggctagctctt
gctgctgagtcggctaaattaggtctcaacgttgggcttataggtcctgatctaccattt
acaaataactatggtgtttgggaagatgagttcaaagatctaggacttgaatgttgcatt
gagcatgtctggagggatactattgtgtatctagacgacaaccctatttatattggtcgc
gcatatggacgcgttagccgccttttgctccacgaggaattattgaaaaggtgtgtcgag
tcaggtgtatcatatcttaacacaaaagtggaaaggattattgaagcttcaggcggccat
agacttgtagaatgtgaaggaaacattgtgattccctgcaggcttgctactgtagcatcc
ggtgcagcctcaggcaaactcctggagtatgaggttgggggtccaagggtttccgtccag
acagcctatggcatcgaggttgaggtggaaaacaatccatatgatcccagcctgatggtt
tttatggattacagagactactggaaacataaagttgattacttagaagcacaatatcca
acatttctttatgccatgcctatgtctcctacaagagtattctttgaggagacatgctta
gcttcaaaagatgcaatgccatttgatctattgaaaaataaactaatgtcaagactggag
actatgggaatccgtattctacaaacttacgaggaggagtggtcttatattccagttggt
ggttcactgccgaacactgaacagaggaacctcgccttcggtgcagctgctagcatggta
catccagccacaggctactcagttgttagatccttgtcagaggctccacaatatgcatct
gttattgcaaatattttgagacaagaccatgttaaaaacatgttcgcgagctcaagaatt
tcagagaatatctcaatgcaagcgtggaatgccctttggccgcaggagaggaaaagacaa
cgagcattttttctgtttggattagccctgatactgcaactggatattgagggcataagg
accttcttccactcatttttccgtttgccgaaatggatgtcacaggggttcctcggctcg
actttgtcgtcaggagacctcctcttgtttgcactatacatgtttgtgatagcacccaat
gacatgagaaagagcttaatcaatcatctcatatctgatcctactggtggaattatggta
aaaacttatcttacactatag
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