Salvia hispanica (chia): 125201533
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Entry
125201533 CDS
T09851
Name
(RefSeq) E3 ubiquitin-protein ligase RZFP34-like
KO
K10144
RING finger and CHY zinc finger domain-containing protein 1 [EC:
2.3.2.27
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125201533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shis04121
]
125201533
Enzymes [BR:
shis01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125201533
Ubiquitin system [BR:
shis04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125201533
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zinc_ribbon_6
zf-CHY
zf-RING_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4
zf-RING_11
zf-RING_4
DmmA-like_C
Motif
Other DBs
NCBI-GeneID:
125201533
NCBI-ProteinID:
XP_047955646
LinkDB
All DBs
Position
1:complement(32018019..32020656)
Genome browser
AA seq
290 aa
AA seq
DB search
MDGDLKNHEISHSHIDDDECKTEMGLGNYGCSHYRRRCKIIAPCCNEVFDCRHCHNEAKN
LIDVDTLERHDIPRHEVKRVICSLCNTEQDAQQICISCGVCLGKYYCSKCKFFDDDVSKN
QYHCDKCGICRTGGEENFFHCDRCECCYSNLLKESHLCIEKAMHHNCPICFEYIFDTTKD
ITVLPCGHTIHLDCVKEMETRFQYACPVCLKSYCDMTRVWEKLDEEVALTPMPQIYQNKM
VWILCNDCGETSEVNYHIVAHKCLNCKSYNTSQTRGGHASCSSGVSEMLG
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggacggtgatctgaaaaatcacgagatttctcattcacatattgatgatgatgaatgc
aagacagagatggggcttggcaactatggctgctcgcattatcggaggaggtgcaagatc
atagcaccttgttgcaatgaagtatttgattgcaggcactgtcacaatgaagcaaagaat
ttgatagatgttgatacacttgaacgccatgatatcccacgtcatgaagtaaaaagggtc
atctgctcattgtgtaatacggaacaagatgctcaacaaatatgtatttcttgtggcgtt
tgcttggggaagtactattgctcaaaatgcaaattcttcgatgatgatgtttcaaagaat
cagtatcactgcgataaatgtggaatctgcagaactggtggtgaagaaaacttttttcac
tgtgatagatgtgagtgttgctactcaaacttgttgaaagagtcacacttatgcatagag
aaagccatgcatcacaactgccccatttgcttcgagtatatatttgatacaaccaaagac
ataacggtcctcccctgtggccacacaattcatctcgactgtgttaaagagatggaaact
cgtttccagtatgcttgcccagtttgcttgaaatcgtactgtgacatgacccgcgtctgg
gaaaagcttgatgaagaggttgctttgacacctatgcctcaaatctaccaaaataaaatg
gtgtggatcctttgcaatgactgtggagaaacaagtgaggtgaactatcacattgtggct
cacaaatgcttgaactgcaagtcttacaacacgagtcagacgagaggaggccacgcgtcc
tgctcgtctggagtatccgagatgctcggatga
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