Salvia hispanica (chia): 125204299
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Entry
125204299 CDS
T09851
Name
(RefSeq) E3 ubiquitin-protein ligase RZFP34-like isoform X1
KO
K10144
RING finger and CHY zinc finger domain-containing protein 1 [EC:
2.3.2.27
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125204299
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shis04121
]
125204299
Enzymes [BR:
shis01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125204299
Ubiquitin system [BR:
shis04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125204299
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zinc_ribbon_6
zf-CHY
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
125204299
NCBI-ProteinID:
XP_047958860
LinkDB
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Position
2:7609561..7611654
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AA seq
279 aa
AA seq
DB search
MDCVFEHLIFSNECMIKQEYGCRHYKRKCKIVAPCCNETFDCRHCHNDAKQNSIEIDPLD
RHDIPRHEITRVICSVCDTEQDVQQNCISCGVCMGKYYCSICKFFDDDILKNQYHCEKCG
ICRTGGKDNFFHCDKCECCYSNVLKDSHICIERAMHHNCPICFEYLFDTPRDTTVLPCGH
TIHLDCVKEMERHFQYSCPVCSKSYCDMTCVWEKLDQEVASTPMPQMYQNKMVWILCNDC
GETSEVNYHILAHKCTNCNSYNTRQTRGRSHTSCASQLV
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggactgtgtttttgaacacttgatattttctaatgaatgcatgattaagcaggaatat
ggctgtcgtcattacaagaggaagtgtaagatcgtagcgccctgttgcaacgagacattt
gattgtaggcactgccacaatgatgcaaagcagaactctatagaaattgatccactcgat
cgccatgatatcccgcgccatgaaattacaagggtcatttgctcagtgtgtgacacagaa
caagatgtccagcagaattgcattagctgtggtgtttgtatggggaagtactattgctcg
atatgcaagttcttcgatgatgatattttaaagaatcaatatcactgcgagaaatgtgga
atatgcagaaccggtggcaaagacaactttttccactgtgataaatgtgaatgctgctat
tcaaatgtgttgaaggattcacatatatgcatagagagagcaatgcatcacaattgtcca
atttgctttgagtatctttttgacacgcctagagacactaccgtgttgccatgcggtcat
accatacatctcgactgcgttaaggagatggagcgccatttccagtattcttgcccggta
tgctcaaagtcgtattgtgacatgacctgcgtctgggagaagctggatcaggaggttgct
tcaacgcctatgcctcaaatgtatcagaacaaaatggtttggattctctgcaacgactgt
ggggaaacatccgaggtgaactaccatatactcgcgcacaaatgcaccaactgcaactcg
tacaacacgaggcagacgagaggacgttcccatacatcatgcgcctcacaacttgtttag
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