KEGG   Salvia hispanica (chia): 125209534
Entry
125209534         CDS       T09851                                 
Name
(RefSeq) RING-box protein 1a-like
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
shis  Salvia hispanica (chia)
Pathway
shis03420  Nucleotide excision repair
shis04120  Ubiquitin mediated proteolysis
shis04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:shis00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    125209534
   04120 Ubiquitin mediated proteolysis
    125209534
  09124 Replication and repair
   03420 Nucleotide excision repair
    125209534
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:shis04121]
    125209534
   03400 DNA repair and recombination proteins [BR:shis03400]
    125209534
Enzymes [BR:shis01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     125209534
Ubiquitin system [BR:shis04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   125209534
  Multi subunit type E3
   SCF complex
    Ring finger protein
     125209534
   Cul2 complex
     125209534
   Cul3 complex
     125209534
   Cul4 complex
     125209534
   Cul7 complex
     125209534
   Cul8 complex
     125209534
   Cul9 complex
     125209534
DNA repair and recombination proteins [BR:shis03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      125209534
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      125209534
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 125209534
NCBI-ProteinID: XP_047965090
LinkDB
Position
3:22686641..22689842
AA seq 123 aa
MASLDTDVDMVPAGDGSSGAGPSTINPSSSTKKPKRFEIKKWNAVSLWAWDIVVDNCAIC
RNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQK
YGH
NT seq 372 nt   +upstreamnt  +downstreamnt
atggcctcacttgataccgacgtcgatatggttcccgccggcgatggatcctccggcgcc
gggccctccaccatcaatccctcatcgtccaccaagaaaccaaagcgattcgagatcaag
aagtggaacgccgtctctctctgggcttgggatatcgtggtcgataattgtgccatttgc
aggaatcatatcatggatctttgcattgagtgtcaggctaatcaggccagcgcaacaagc
gaggaatgcacagttgcatggggtgtatgcaatcatgccttccacttccattgcattagc
agatggctcaagacccgtcaagtttgtcctctggataatagcgagtgggagtttcagaag
tatggtcactag

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