Salvia hispanica (chia): 125210100
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Entry
125210100 CDS
T09851
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein GMI1
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shis03036
]
125210100
03400 DNA repair and recombination proteins [BR:
shis03400
]
125210100
Chromosome and associated proteins [BR:
shis03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
125210100
DNA repair and recombination proteins [BR:
shis03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
125210100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c_3
Motif
Other DBs
NCBI-GeneID:
125210100
NCBI-ProteinID:
XP_047965634
LinkDB
All DBs
Position
3:complement(38266608..38278779)
Genome browser
AA seq
1784 aa
AA seq
DB search
MYSKSPLSGTKKRPHEASGVEGPEKSRPVVDLYGDVFDNVKVMTPPMKLNKRPREETPGK
SSSGTVQAKDDGCEMVYRFRVLLPNGTAVELKMSELRKEMPIEKFIGIVRREYSLLANQK
TSLGQKRKINWDYQDLHFTDTQENKIKLKIDFQKFLPNIWHLLWLHDGSLEPDEYEDMWD
LTPDTDLLKELPDDYTCETALADLIDNSLQALWSNGKGERRLISVQLEPGKISIFDSGPG
MDGANGNIVKWGKMGASLHRSMREKAIGGEPPYLMPFFGMFGYGGPVAAMCLGRRAVVSS
KTKQSNKVFTLHMEREALVSASHLENCWKTKGGIRDPLKDENLKSPHGSFTKVEIFDPKP
KVKNLYIRQLRCKLKDIYFPYIQCDEMSGKTSRPIIFEVNEMDLAGIQGGEVATTNMHSC
NGPEFVVQVQFSTTADSSTLAGQNQRVSATANASLKCVYFPIVGGTESIQMILDKLNEDH
CGIKESFESFSHVSVRRLGRLLPDVRWGLLPFMEPKHKVGERAKILMRFCSRVKCFIDTD
SGFNPTPHKTDLAHHHPYTKALKNFGKRSDDDRKVKISRDGKALTFGQLQTLYNDWIMEM
HDRYDEETDDGLDEPILIVGASKEKKNKKLDLKSMLRVHKEIQRKGIFWKAGMNIKILRG
ACAGCHNNNVYATLEYVILEGLQGDASGEARLICRPLGLPEEKACHLLVREGNCTIDIND
SCVFPIRIIDSDKCLPVDDIEWKAKLEAFKQKLPAAIDLLSQADCQELEIDGGLPSLLNA
GDFLPDNIVAVVRPCSFNNGNSSKRLDQKFIVRDNQEMILEIVKQRASDGEAGNREHAYS
VRHPPESYKGLHGLYIFPLGSRQRLLCEEPGILTCSFSLKDIKDIKLEHKVQVQGPYGIG
RWVVLNHDENEPYTVRVGSCCRTLSVVCLDEHKKRIRFKGFPDLLIKLTSNGRNLAQDCR
KKVEITPDKLTMKIKDIFISSSELDHIRPNYEARLLLSTPDKAFSVALTCRVMPAPPKKI
TVHPTELRKQLLPGQIIKELALEVFDEYGNHLKENDLILLRLDGLSIQDGSGINCGLVME
SKKKVDANGRVDLSNLLKVSAGYGKRVMLSVMSKDGVIFELRFQTEVRELRALQKVFMNY
EAGSLLKDVAFEIVDSEGKVDERIHDDDKHGQSHTLTIKCRSFRIDESVKYRFLNGCCTV
PSIPLPCEEGAVFFEAVHSRHPELKFAIKVIVQKARQKNRDYVRNVRNHVDIIGNHIHQP
KNSFENEAAPEILPSQVHLEKQQQEKLDSAMNPDDVGNPILSTPISSEHEHNFPILPSLR
VSDVMNEISSPHSLGNPILSTPRSSEHGQNLPVSPPSRVSQVMNETFSPHSSGSPFLSRV
SQEMNMTFSPPSSCNSISTPSSSKLGFLPVSPSLRVPQVKNEILSPHSSKGCVSPISDSP
PLKTPELDTHTQSRNPVTLCSKESCSEQELEDDLINSAMQMSSQMDKLEIQRSTLSQIQL
EISQLQAVIAPDLGTNALNVCGLYPTMKQIESRSQTAAAAICKMLEDDLVCKGIVGVVAL
LGTVESFELSRMLALFLGEDQMLAIVCRNYAAAQSLDANTLHKLADYNAFCLEDIRPRSN
EPSSELLPLRDPTLPNGSAHHGFLGYAVDLINIEPDRLHWRTTSGHGLRETLFHRLFGKL
QVYKDRECMMAAAQSCIEGAVSLDGGVLRGNGLLSLGLREPKILFPVMKKATHADTLRKL
AAKEMELVKIKQRVDEELDVFRLCHEKFSICQQKYNSYMSQTHI
NT seq
5355 nt
NT seq
+upstream
nt +downstream
nt
atgtactcgaagtctcctctcagcggaacgaagaagaggcctcatgaggcgtcgggtgtg
gaggggccagaaaagagtcggcctgttgtggatttgtatggtgatgtttttgacaatgtg
aaggtaatgacaccccccatgaagttgaacaaaaggccccgtgaagagacaccgggaaaa
agttcaagtgggactgttcaagccaaagatgatgggtgtgaaatggtatacaggtttcgt
gtactacttccgaatggcactgctgtggagctcaaaatgagtgagctgcgcaaagagatg
ccaattgagaagttcattggtatagttagaagagaatattctcttctagccaaccagaag
acgtccttgggacaaaagagaaaaatcaattgggactaccaggacctacacttcacagat
acacaagaaaataagataaaactcaaaatagatttccagaaattcttgcccaacatctgg
cacttgctttggcttcatgatggatccctagagccagatgaatatgaggacatgtgggat
cttaccccagataccgatttgcttaaagagttacccgatgattatacatgtgaaacagct
ctggctgacctgatagataattccctacaagctttatggtccaatggcaaaggagaaaga
agattaattagtgtgcaattggagcctgggaaaatttccatttttgactcaggtccagga
atggatggtgctaatgggaacatagtcaagtggggaaaaatgggagcatctcttcaccgc
tccatgagagaaaaagcaatagggggagaacctccatatctaatgcctttctttggaatg
tttggttatggtggtccagtagcggcaatgtgtttgggaaggcgagctgttgtttcttca
aagacaaagcaaagtaacaaggtatttacattacacatggaaagagaagcattagtaagt
gcctcccatctggaaaactgctggaagaccaaaggaggtattagagatcctttgaaagat
gaaaatctgaaatctccacatggaagcttcacaaaagttgaaatatttgatcccaagcca
aaagtgaagaatctgtacataaggcaattgcgatgtaaattgaaggacatatactttcct
tatatccagtgtgatgaaatgtcaggaaagacaagtagaccgattatatttgaggtaaat
gagatggacttagctggaatacaaggtggggaagttgccactacaaacatgcactcatgt
aatggtcccgaatttgtcgtgcaagttcaatttagtaccactgcagattcttctacattg
gctggtcaaaatcaaagagtgtctgctacagcaaatgcaagtctgaagtgtgtttacttt
cccatagttgggggtacagaaagtatacagatgatacttgataagttaaatgaagatcat
tgtggaatcaaagagagctttgaaagcttcagtcatgtatctgttcgaaggttgggccgt
ctcctgccagacgttcgctggggtttgcttccttttatggagcccaaacataaagtaggt
gaaagagctaagattcttatgagattctgctctagagtgaaatgtttcatagatactgat
tccggcttcaatccaacacctcataagacagatttagcccaccatcacccctacaccaag
gctctaaagaactttggcaagagatcagatgatgatagaaaagtcaaaatctctagagat
ggaaaggctttgacattcggtcagctacagacgctatataatgattggattatggaaatg
catgatcgttatgacgaggaaactgatgatggcctggatgaacccatacttattgttggt
gcttcgaaggagaaaaagaataaaaagctcgacctcaaatctatgctgagggttcataaa
gagatccagaggaagggcatattttggaaagctggtatgaatatcaaaattttaagggga
gcgtgtgctggatgccataacaacaatgtgtatgccacacttgagtatgtcatcttggaa
gggcttcaaggggatgcttctggcgaggctcgactaatttgcaggccacttggtcttccc
gaagaaaaagcatgccatcttttagttagggaggggaactgcactattgacattaacgac
tcttgcgtgtttccaataagaataattgattctgacaagtgcttacctgttgatgacatt
gaatggaaagcaaagcttgaggcgttcaagcagaaattgcctgctgccatagatttatta
agtcaggccgattgccaagaattggagattgatgggggattgcctagtctactaaatgcc
ggagattttcttccggataacattgttgctgttgtacgtccgtgttcttttaataatgga
aatagctctaagagattggaccaaaagttcattgttagagataatcaggaaatgattcta
gaaatcgtcaaacagagagctagtgatggtgaagctggaaatagggagcatgcttattct
gtgaggcatccacctgaatcctataaggggcttcatggtctatatatatttccattgggc
tcgagacagcgcctgctatgtgaggagcctggcatcttaacttgttcattttcactgaaa
gatatcaaggatattaaacttgaacataaggtgcaagttcaggggccatatggaataggc
agatgggtagtcttaaatcatgatgaaaatgaaccgtacaccgtaagggtgggttcttgt
tgcagaactctatctgtagtttgccttgatgaacacaagaaacgcatcagatttaaaggt
tttccagacttgctcatcaagctcacctcaaatggtagaaatcttgctcaagattgtaga
aagaaagtggaaattacaccagacaagttaactatgaaaattaaggatattttcatttca
agcagtgaattagatcatatcaggccaaattatgaagcaaggttactcctaagcacacca
gataaagcattttcagttgctttaacatgtcgagttatgcccgcacctccgaaaaagatc
actgtgcatccaactgaactacgaaaacagttacttcctggccagattatcaaggaactt
gcactagaagtgtttgatgaatatggcaaccatctaaaagaaaatgacctcattttgcta
agattagatgggttgtccattcaagatggaagtggaatcaactgtggtcttgttatggag
agtaaaaagaaggttgatgctaatggccgcgttgatctgagcaatcttcttaaagtttct
gccggatatggcaaaagagttatgcttagtgtaatgtcaaaagacggagttatttttgag
ctgcggtttcagacagaagtaagagagctacgagcactgcaaaaggttttcatgaactat
gaagcaggttccctgttaaaggatgttgcatttgagattgttgattctgaaggaaaggtt
gatgaaaggatccacgatgacgataaacatgggcagtctcatactctgacaatcaagtgc
agatcatttcgcattgatgagtctgtgaaatacaggttcctcaatggatgttgcactgtt
ccctctattcctctcccttgtgaagaaggagctgtcttctttgaagctgtgcattctcgt
catccggaactaaagtttgccataaaggttattgttcagaaggcgcggcaaaagaatcgt
gattatgtgagaaatgtgagaaatcatgtggatataatagggaatcacatacatcagccc
aaaaattcatttgaaaatgaagcagctccagaaattttgccgagtcaggttcatcttgag
aaacagcagcaagagaaacttgacagtgccatgaatcccgacgatgtaggaaatccaata
ctttcaactccaatatcatcagaacatgaacataacttccctatcttgccttccttgagg
gtatcagacgttatgaatgagatctcctctccgcatagtttagggaatcccatactatca
accccaagatcatctgaacacggacagaacctccctgtctcaccgccctcaagggtatca
caagttatgaatgagaccttttcaccgcatagttctgggagtcctttcctatctagggtt
tcgcaagagatgaacatgaccttttctccgcctagttcatgtaattcaatatcaacccca
agttcatccaaactaggattcctcccggtctcaccttccttgagggtaccacaagttaag
aacgagatcttaagtccgcatagttcaaaggggtgtgtatcgcccatcagtgattcaccc
cctttgaagactccggaattggatacacacactcagagcagaaatccagttacattatgt
agtaaggaaagttgttcggagcaggagctagaggatgatcttattaacagtgcaatgcaa
atgtcaagtcaaatggataagttagagatacaacggagtactctgtcacaaatccagcta
gaaatatcgcagttacaagctgtgatagctcctgatcttggtaccaatgcattgaacgta
tgtggcctatacccgactatgaaacaaatagaaagcagaagtcagacagcagctgctgca
atctgcaaaatgctggaagatgatctagtgtgcaaaggcattgtgggcgtggtggcactt
ttgggaacagttgaaagcttcgagctcagcaggatgctggcactatttctcggtgaggat
caaatgcttgcaattgtttgcagaaactacgcagccgcacaatctctagacgccaacacc
ctgcacaagttggccgactacaatgcattttgcctcgaggacatcaggccaagatccaac
gagccaagcagcgagcttctaccattgcgggacccgaccttaccaaatggcagcgcccat
catggtttccttggctatgcagttgacctgattaacatagaaccggaccgtttacattgg
agaaccaccagcggccatggcctccgcgagactttatttcatcgcctttttgggaagctt
caagtctataaagacagggagtgcatgatggcagcagcccaatcttgcatcgagggagct
gtctcgttagatggaggtgtcctgagagggaatggactcctctctctaggccttcgggaa
ccaaaaatcttgtttccagtgatgaagaaagctacgcatgcagatactttgagaaagttg
gcagcaaaagagatggagctggtgaagataaagcagcgcgtggacgaggaactagacgtg
tttcggctttgccatgagaagttttccatctgccaacaaaagtacaacagctacatgtct
cagactcatatatag
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integrated database retrieval system
