Salvia hispanica (chia): 125214312
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Entry
125214312 CDS
T09851
Name
(RefSeq) transcription factor PCL1-like isoform X1
KO
K28173
GARP family transcription factor, LUX subfamily
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shis03000
]
125214312
Transcription factors [BR:
shis03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
125214312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
125214312
NCBI-ProteinID:
XP_047971227
LinkDB
All DBs
Position
3:complement(4745820..4749266)
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AA seq
321 aa
AA seq
DB search
MSEEAKIDDAVSDWEDGLPSADDLTPLSQSLIPLELASAFRISPDPPRTAVDVTRASRTT
LSSLRVSSSSAAAANFKPFGDDHAMAADDAADEGSDPKKTRRADSPDDPTVDNCTDDQST
ATAKALKRPRLVWTPQLHKRFVDVVAHLGLKNAVPKTIMQLMNVEGLTRENVASHLQKYR
LYVKRMQGLSNEGPSPSDHLFASTPLPTQSFNESSSAGPSHGNGIANGSHSSVGNNGSSA
NNHMGMSIPMPYPPPPQIVPMQMMGMAHGHGYHGYEAAHSHHSHHYQQQQYGSMMQQQRD
WSGNKYNGYPQHHTTQNNSKC
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagaagccaagatcgacgacgccgtctccgactgggaggacggcctcccctcc
gccgacgacctcacccccttatcccagtccctgatccccctcgaattggcctccgccttc
cgcatctcgccggacccgccccgcaccgccgtcgacgtcacccgcgcctcccgcaccacc
ctctcctccctccgcgtctcctcctcctccgccgccgccgccaatttcaagcccttcggc
gacgatcacgccatggccgccgacgacgccgccgacgagggctccgacccgaagaagacc
cgccgcgccgactcccccgacgatccgacggtcgacaactgcaccgacgaccagtcgacg
gccacggcgaaggctctgaagcggccgcgcctcgtgtggaccccgcagctgcacaagcgg
ttcgtggacgtggtggcgcacctagggctgaagaacgccgtgccgaagacgattatgcag
ctgatgaatgtcgagggtttgactcgggagaacgtcgccagccatctccagaagtacagg
ctgtatgtgaagaggatgcagggtttgtccaacgaggggccgtcgccgtccgatcacctc
tttgcctcgactccgctgccaacgcagagcttcaacgagtcgtccagcgccggccccagc
cacgggaatggaattgcaaacggcagccatagcagtgttggtaataatggaagtagtgct
aataaccatatggggatgtcaattccgatgccataccctccgccgcctcagattgtgccg
atgcagatgatgggaatggcgcatggacacggctaccatggatacgaagctgcgcattcg
catcatagtcatcactatcagcagcagcagtatgggagtatgatgcagcagcagagggat
tggtctggcaataagtataatggctatccgcagcatcatacgactcaaaacaatagcaag
tgttag
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integrated database retrieval system
