Salvia hispanica (chia): 125219638
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Entry
125219638 CDS
T09851
Name
(RefSeq) BRISC and BRCA1-A complex member 2-like isoform X1
KO
K12173
BRCA1-A complex subunit BRE
Organism
shis
Salvia hispanica (chia)
Pathway
shis03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
125219638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shis04121
]
125219638
03036 Chromosome and associated proteins [BR:
shis03036
]
125219638
03400 DNA repair and recombination proteins [BR:
shis03400
]
125219638
Ubiquitin system [BR:
shis04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
125219638
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
BRISC complex
125219638
Chromosome and associated proteins [BR:
shis03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
125219638
DNA repair and recombination proteins [BR:
shis03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
125219638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE
Motif
Other DBs
NCBI-GeneID:
125219638
NCBI-ProteinID:
XP_047977623
LinkDB
All DBs
Position
4:complement(56576518..56581362)
Genome browser
AA seq
372 aa
AA seq
DB search
MAIDTVPPLISAQINYLIGHCPFSVKVEQMCSGCKNPNLLDRFTLVIPYCLDKIKWDITF
NAMYPLAAPDVIFGPEDEGFQPYASGTGESSKNCLANWNSRDPSQLQSLIVELRDAYMAY
QRRRIGEIDDERVKFEISTMLSREGIEMYMSLGTDKPEEVKFAVSLLDIDLNKLVAGCTW
RHPQKVYLQVIFPVGKKYSSMPPSPRLKLISSSELKALFSTEDFKLPTWVDGMCTAEYLP
NLEQMVNTQVNDAVSSIEIRRKFIQSLAPHLGRPIEADTVFCKRATFLCSSGLFTFQVHF
TLPLQFPKQQPALVLQSSQHFNAHGVPVKSPTLSEYPWSPRWNSSEQADRIFDFLADEAL
NFKKYCNQLNQQ
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcgacaccgtgccgccgctaatctccgcccaaatcaattatctcatcggccac
tgccctttctccgttaaggttgagcaaatgtgttcgggatgcaaaaaccctaacttactt
gatcgcttcactctagtcatcccttactgcctcgacaaaataaaatgggatataacattc
aatgctatgtatccgctggcggcgcctgatgtgatatttggacctgaagatgaaggtttc
cagccgtatgctagtggcactggagagtctagtaaaaattgtttggccaattggaatagt
agggatccatctcagctacaatctcttattgttgagctgagggatgcatatatggcatac
caaaggagacggataggtgagattgatgatgagagagtaaaatttgaaatcagtactatg
ctttcaagagagggaattgagatgtacatgagtttagggaccgacaagccagaggaggtt
aagtttgctgtgtctttattggatattgatttaaataaattggttgctggatgcacctgg
agacatccacagaaagtatacttgcaggttatatttccagttgggaaaaaatattctagc
atgccaccatctccacgtctaaagttgatctcttcttcggaactgaaagccttattttct
actgaagattttaaacttcctacttgggtggacgggatgtgcacagctgaatatcttcca
aatctggaacaaatggtgaacacacaggttaatgatgcagtctcatcaattgaaataaga
aggaagtttatccagtcattggcacctcatcttggaaggcctatagaagctgatacggtc
ttttgcaagagagcaacgttcctatgttcatctggattgttcacgtttcaggttcatttc
actctccctcttcagttcccaaagcagcagccagctttagtacttcagagttcccagcat
ttcaatgcacacggtgtacctgtcaagtcacccactctatcagaatatccatggagtccc
agatggaattcatcagaacaggctgatcgaatctttgactttctggcggatgaggccttg
aatttcaagaagtattgcaatcagttgaatcaacaatga
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