Shewanella halifaxensis: Shal_0198
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Entry
Shal_0198 CDS
T00654
Name
(GenBank) transporter, hydrophobe/amphiphile efflux-1 (HAE1) family
KO
K18138
multidrug efflux pump
Organism
shl
Shewanella halifaxensis
Pathway
shl01501
beta-Lactam resistance
shl01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Shal_0198
01503 Cationic antimicrobial peptide (CAMP) resistance
Shal_0198
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shl02000
]
Shal_0198
01504 Antimicrobial resistance genes [BR:
shl01504
]
Shal_0198
Transporters [BR:
shl02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Shal_0198
Antimicrobial resistance genes [BR:
shl01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Shal_0198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
ABZ74774
UniProt:
B0TN62
LinkDB
All DBs
Position
234013..237171
Genome browser
AA seq
1052 aa
AA seq
DB search
MARFFIDRPIFAWVIAIIVMLAGVLSIVGLPVSQYPSIAPPSVVISAVYPGASAKTMEDS
VTQVIEQRMTGLDNLRYISSTSDSFGNAQITLTFNAEADPDIAQVQVQNKLQLAMPLLPQ
EVQAQGVNVTKSSAGFLMVAAFVSEDGSLDKNDIADYVGSNIQDPLSRVPGVGTIELFGA
QYAMRIWLDPLKLTQFNLTSQDVISSIREQNAQVSAGQLGGAPSLPGQELNATVSAQSRL
QTAEQFQKIIIKADTSGAKVFLEDVARVELGAESYAVESFYNGKPAAGIGIQLATGANAL
ATAEGVRAKIAELKPFFPEGMEVVYPYDTTPFVEKSIEGVVYTLLEAVVLVFLIMYLFLQ
NFRATLIPTIAVPVVLLGTFAILAVAGFSINTLTMFAMVLAIGLLVDDAIVVVENVERVM
QEEGLSPIEATKKSMDQITGALVGIGLTLSAVFVPMAFMSGSTGVIYRQFSITIVSAMAL
SVMVAIILTPALCATMLKPIAKGESHAKTGFFGWFNRKFDALTSRYEANVAAMIKRTGRT
MMVYLAITVAVGWIFMRMPTAFLPDEDQGILFTQAILPVNSTQQETKQVLEQVSDYFLND
ESANVKSVFSVSGYSFAGMGQNMGLAFVGLKDWSERSNPGQDVQSVANRAMAKFSQMKEA
FVFAFVPPAVIELGTANGFDFYLQDKNGQGHEKLVEARNMLLGMAAQNPNLVGVRPNGQE
DAPLYQVHIDHGKLRALGIDIESVNSVLGTAWGGNYVNDFIDRGRIKKVYVQGEAEYRMQ
PEDLDSWYVRNSKGEMVPFSAFASGTWGYGSPRLERFNGLPAMNIQGGTAPGYSTGAAMD
DIEAMVKKLPPGFGIEWNGLSYEERLSGNQAPMLYALSIVVVFLVLAALYESWSVPFAVV
LVVPLGIIGALIAMNGRGLPNDVFFQVGLLTTVGLATKNAILIVEFAKEYYEKGAGLVEA
TLHAVRVRLRPILMTSLAFGLGVVPLAISSGVGSGSQNAIGTAVLGGMMSSTFMGIFFIP
IFFVIVERMFSKRERDAARAVKAEAKAAKANK
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtttctttatcgatcgccctatttttgcatgggtgatcgctattattgtgatg
ctggcaggtgtgctctctattgtgggcctacccgtatctcagtacccgagtattgcaccg
ccgtcggttgtgattagcgccgtttatcctggtgcatcggctaagacgatggaagactcg
gtaactcaggttattgagcagcgaatgacaggtcttgataacctgcgctacatttcatcg
accagcgatagctttggtaatgcgcaaattaccttaacctttaacgccgaagccgatcct
gatatcgcgcaggtacaggtgcagaacaagctacagcttgctatgccactattaccgcaa
gaagttcaggcacagggtgttaacgtaactaagtcgagtgctggtttcttgatggtagct
gccttcgtatctgaagacggttcactggataaaaatgatattgccgattatgtgggttca
aacattcaggatccgctaagccgtgttcctggtgtgggcactattgagctatttggtgcg
cagtatgcaatgcgtatctggcttgacccactaaaattgacgcaatttaacctaacaagc
caagatgttattagctcgattcgagagcaaaatgctcaggtttcagcggggcagttaggt
ggtgcaccatcgctaccgggccaagagctaaacgcgacagtatcggctcagagccgacta
caaacggccgaacagttccaaaaaatcatcattaaagccgatacttcgggcgctaaggtg
ttcctagaagatgtggcgcgtgttgagctgggtgctgaaagctacgcagttgagtcattt
tataacggcaagcctgcagctggtattggtattcagttagcaacgggtgcaaacgcattg
gctacggctgaaggtgtacgtgcaaagattgccgaactgaagcctttcttccctgaaggg
atggaagtggtttatccatacgacaccacaccattcgttgagaaatcaattgaaggtgtt
gtatatacactgctcgaagctgtggtgttagtatttttgatcatgtacctgttcttgcag
aacttccgtgcaacgctaattccaacgattgcagtgccagttgttctattgggtacattt
gcaattttggctgtagcaggtttctctattaacaccttaaccatgttcgctatggtactg
gcaattggccttctggttgatgacgcgattgtggtggtggagaacgttgagcgtgtgatg
caggaggaggggctcagtccaattgaggccaccaagaagtcgatggatcagatcaccggc
gcgctggtgggtattggtctaacgctgtctgctgtatttgttccgatggcatttatgtcg
ggctcaacaggtgtgatttaccgtcagttctcaatcacgattgtatcggcgatggcactg
tcggtaatggttgctatcatcctgacaccagcactgtgtgccactatgcttaagccaatt
gctaagggcgaaagccatgcaaaaacgggcttctttggttggtttaaccgtaagtttgat
gcattaacgtctcgttatgaagctaacgttgcggcaatgatcaagcgtactggtcgcact
atgatggtctaccttgctatcacggttgccgtgggttggatcttcatgcgtatgcctaca
gcattcctgccagacgaagaccaagggatcttgtttactcaggctattttgcctgtcaac
tcgactcagcaagaaaccaaacaagtacttgagcaagtgtctgactacttcctaaacgat
gaaagtgccaacgttaaatcagtatttagcgtatccggttacagcttcgcgggtatgggt
caaaacatgggtctcgcgttcgtcggtcttaaagactggtctgaacgttcgaatccaggt
caagacgtacagtcagttgctaaccgtgccatggccaagttctcgcagatgaaagaagcc
ttcgtgtttgccttcgtaccgccagcggtaatcgaattgggcaccgctaacggtttcgat
ttctacctgcaggataagaatggccaaggtcatgaaaagttggttgaagcgcgtaacatg
ttgctgggtatggcagcgcagaatccaaacctagtgggcgtacgtccaaatggtcaagaa
gatgcaccactttaccaagttcatatcgatcatggtaagttgcgagccttaggtatcgat
attgaatcggttaacagcgtattaggtactgcctggggtggtaactacgttaatgacttt
atcgaccgtggccgtattaagaaagtatacgttcaaggtgaagctgagtaccgtatgcag
ccagaagatcttgattcttggtatgtacgtaactctaaaggtgagatggttcctttctct
gcctttgcttcaggcacttggggatatggttctccacgtctagagcgtttcaacggctta
cctgcgatgaacattcaaggtggtacagcaccaggttacagtactggtgcggcaatggat
gatattgaagctatggttaagaagctgccacctggatttggtatcgagtggaacggtctt
tcttatgaagagcgtctgtcgggtaaccaagcgccaatgctttacgccttgtctattgtg
gtggtattccttgtactagctgcactatacgagagctggtcggtaccatttgcggtagta
ctcgttgtacctctgggtattatcggtgccttgattgcgatgaatggtcgtggtttacct
aacgacgtgttcttccaggtcggtctactaaccaccgtaggtctagcgactaagaatgct
atcttgattgtagaattcgccaaagaatactatgagaaaggtgctggactcgttgaggca
accttacacgcggttcgagtgcgtttacgtccaatcttgatgacgtcgctagcattcgga
ctaggtgttgtgccgttagcaatcagtagtggtgtgggttcagggagccagaacgccatt
ggtactgcggtacttggcggtatgatgagctcgacctttatgggtattttctttatccca
atcttcttcgtgattgttgagcgtatgttcagtaagcgcgagcgagatgcagctagagca
gtaaaagcggaagccaaagcggcgaaagctaacaaatag
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