Shewanella halifaxensis: Shal_2319
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Entry
Shal_2319 CDS
T00654
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
shl
Shewanella halifaxensis
Pathway
shl01501
beta-Lactam resistance
shl01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Shal_2319
01503 Cationic antimicrobial peptide (CAMP) resistance
Shal_2319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shl03036
]
Shal_2319
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shl02000
]
Shal_2319
01504 Antimicrobial resistance genes [BR:
shl01504
]
Shal_2319
Chromosome and associated proteins [BR:
shl03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Shal_2319
Transporters [BR:
shl02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Shal_2319
Antimicrobial resistance genes [BR:
shl01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Shal_2319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
YknX_C
BSH_RND
BSH_CzcB
Beta-barrel_RND
RND-MFP_C
CzcB_C
BSH_LcnD
HH_MFP_RND
HH_EMRA
HH_AAEA_pHBA
DUF7801
Motif
Other DBs
NCBI-ProteinID:
ABZ76878
UniProt:
B0TVJ3
LinkDB
All DBs
Position
complement(2805061..2806140)
Genome browser
AA seq
359 aa
AA seq
DB search
MKKIIIILTLLVVGAYLYFQQPPAEQVKKSRPIPNVVVTKAEIQPIRDEVEALGTSKANE
SITVTPKVTEVVTEVNFNDGELVQKGRLLVQLQDSEQLARVTVAKVKVKDHQRELERIRT
LVTSQTIAELERDRLQTLIDTAKAELAQAQSALKDRRISAPFSGALGLRQVSVGALVSPG
NAITTLDDISVIKLDFSVPERFLQALALGKQVEATAVAFDGEVFEGKVVSIDSRINPKTR
AVIVRAKIPNPKQRLLPGMLMKVKLIKTSRDALILPESAIIPIQDRHYVYVVNDEGVIEQ
KQVSLGLRKRGWVEIIDGVVLNEHVVIRGLLKVRPGDKVKVTFSERFSFLKQASVEPVV
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaataataataatccttacattgctagtagtcggcgcatatttgtattttcag
caacctccagcagaacaagtaaaaaaatctcgacctatacctaatgtggttgttactaag
gctgagatacagccgatacgtgacgaagtagaagcgctgggaacgagtaaggctaacgag
tcaattactgttacgccaaaagtcactgaggtggtgacagaagtcaattttaatgatggc
gagttggtccagaaaggtcgtttactggttcaacttcaagacagtgagcagcttgcgcgt
gttaccgtcgcaaaagtaaaagtcaaagatcaccaacgagaacttgaacgcattcgcacc
ttagtcaccagccaaacaattgcagagcttgagcgcgataggttacaaaccttaatcgat
accgccaaagcagagcttgcacaggcacaatcggctttgaaggatcgccgtattagtgcc
ccgttttcaggtgcgttaggattacgtcaagtcagtgtcggcgcgctcgtttctcctggt
aacgccattactactttagatgacatctctgttatcaaattggatttttcagtgcctgag
cgctttttacaagccttagcgctaggtaaacaagttgaagctactgcagtagcatttgac
ggtgaagtgtttgaaggaaaggtggtgtcaattgatagtcgcattaaccctaagacacgc
gcggtaatcgttcgcgccaagatccccaatccaaagcaaaggctccttccaggcatgttg
atgaaagtaaaactgattaagacgagccgcgatgcactcatattgccagaatctgccatt
attcccattcaagataggcattatgtctatgtggtcaatgacgaaggcgttattgaacaa
aaacaagtgtctttaggcctgcgtaagcgtggttgggtcgaaattattgacggcgtagta
cttaacgaacatgtcgtgatccgggggcttttaaaagtacgtcctggcgataaagtcaaa
gtgacctttagcgaacgttttagttttcttaagcaggcgagtgtggagcctgtcgtatga
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