Shewanella halifaxensis: Shal_2888
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Entry
Shal_2888 CDS
T00654
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
shl
Shewanella halifaxensis
Pathway
shl01501
beta-Lactam resistance
shl01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Shal_2888
01503 Cationic antimicrobial peptide (CAMP) resistance
Shal_2888
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shl03036
]
Shal_2888
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shl02000
]
Shal_2888
01504 Antimicrobial resistance genes [BR:
shl01504
]
Shal_2888
Chromosome and associated proteins [BR:
shl03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Shal_2888
Transporters [BR:
shl02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Shal_2888
Antimicrobial resistance genes [BR:
shl01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Shal_2888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
Lebercilin
Motif
Other DBs
NCBI-ProteinID:
ABZ77437
UniProt:
B0TMS7
LinkDB
All DBs
Position
3510288..3511391
Genome browser
AA seq
367 aa
AA seq
DB search
MNKWVIGVVTVAILAFGSVIGFNLFVNKKIATALANLPEPVYPVTVEKLTPNTWDQNIKA
IGYIEPNQGVNISNEVAGLVTAINFENGDVAKANTTLVNINSSVQAAQLKEQEVQLPAVR
DDYNRQLRLYKDKSISQQSLQAAQAKYEALQANIESLQANIELRQIKAPFNGVLGIRNIN
LGQFLSAGTNIVRLEDLSVMRVRFSVPQSQIGKLSVGQPISLTVDPYPDRIYSGKINAIE
PVINYKTGLVMIQAELPNDDQTLRGGMFAEVSVALSNLEQQFVVPQTAIVFALYGNSVFV
INKQGDDTRVHQVTVDVLQRNGNYALVKGALTFGQEVVTTGILNLGNNTKVSVTPNPITP
SDKMPKL
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatgggtaataggggtagtaactgttgccatactagcctttgggagcgtgata
ggttttaacctttttgttaataaaaaaatagcgactgccctcgccaacctccctgaaccc
gtctatcccgtaacagttgagaaattaacccctaatacttgggaccaaaacattaaagcc
attggttatattgaacctaatcaaggggtcaatatttctaatgaagtggcaggcctagtc
actgcgattaattttgaaaatggtgatgtagctaaggccaatactaccttagtcaacatc
aactcatctgtacaagctgcacaacttaaagagcaagaagtacagttacccgcagtaaga
gatgattacaacagacagcttaggctttataaagacaagtccatatcacaacaaagtcta
caggcagcacaagcgaaatatgaagcactgcaggccaacatagaaagcctgcaagcaaat
attgagcttcgtcaaatcaaagccccatttaatggcgtactgggtattagaaatatcaac
ctagggcaatttctttcagcaggcactaacattgttcgtctagaagacttgtcagtaatg
cgagtgcgcttcagtgtcccccaatctcaaataggtaaactcagtgttggtcaacctatt
tcattaaccgttgacccctatcctgaccgtatatactcaggaaaaattaacgcgattgag
ccagtgatcaattacaaaacgggcttagtgatgattcaggcagagctgcccaatgatgat
caaacgttacgcggcggtatgtttgccgaagtcagtgttgccttaagtaacctcgaacag
caatttgtagtaccgcaaacagccattgtatttgctttatatggcaactctgtatttgta
atcaataagcaaggtgatgacacgcgagttcatcaggtaaccgttgacgtattacaaaga
aacggtaactacgcgttagttaaaggcgccttaacgtttggtcaggaggttgtgacaacc
ggtattctcaatcttggtaacaacactaaagtcagcgtgacaccgaatccgattacgccc
tcagataaaatgccaaagctgtag
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