KEGG   Shewanella sp. MR-7: Shewmr7_1905
Entry
Shewmr7_1905      CDS       T00389                                 
Name
(GenBank) endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
shm  Shewanella sp. MR-7
Pathway
shm03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:shm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Shewmr7_1905
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:shm03400]
    Shewmr7_1905
Enzymes [BR:shm01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Shewmr7_1905
DNA repair and recombination proteins [BR:shm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Shewmr7_1905
 Prokaryotic type
     Shewmr7_1905
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S RecR_HhH HHH_8 Aldose_epim HHH_5
Other DBs
NCBI-ProteinID: ABI42894
UniProt: Q0HVG1
LinkDB
Position
complement(2249999..2250640)
AA seq 213 aa
MNQEKRIQILTRLRENNPKPETELNFSSPFELLVAVTLSAQATDVSVNKATDKLFPVANT
AHSIYALGVDGLKEYIKTIGLYNNKAINVIKACEILIEKYNGEVPEDREALESLPGVGRK
TANVVLNTAFGWPTIAVDTHIFRMANRTKFAPGKNVVEVEERMLKVVPAEFKVDVHHWFI
LHGRYTCLARKPRCGSCIIEDLCEFKEKVYPEE
NT seq 642 nt   +upstreamnt  +downstreamnt
atgaatcaagaaaaacgcatccaaatcctcacccgccttcgcgaaaacaatcccaaaccc
gaaaccgagctgaatttctccagtccctttgaattactggtggcggtgactttatcggcg
caggcaaccgatgtgagcgtgaataaggcgactgataaactgtttccagtcgccaatacc
gcccacagtatttatgccttaggcgtggatggattaaaggaatatatcaagacgattggc
ttgtataacaacaaggccattaatgtgattaaagcctgtgagatcttgattgaaaaatac
aatggcgaagttccggaggacagagaggcgctagagtcgcttcctggtgtcggtcgtaaa
accgctaacgtggtgctcaataccgcctttggctggccgaccatcgccgtcgacacccat
atctttcgcatggcaaaccgcactaaatttgcccccggtaaaaacgtggtcgaagtcgag
gagcgcatgttaaaggttgttcccgccgaatttaaggtcgatgtacaccactggtttatt
ctgcatggccgctatacctgtctggcgcgcaaaccgcgctgtgggagttgcataattgag
gacctttgcgagtttaaggaaaaggtctatcccgaagaataa

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