Shewanella sp. MR-7: Shewmr7_3599
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Entry
Shewmr7_3599 CDS
T00389
Name
(GenBank) 2-oxo-acid dehydrogenase E1 subunit, homodimeric type
KO
K00163
pyruvate dehydrogenase E1 component [EC:
1.2.4.1
]
Organism
shm
Shewanella sp. MR-7
Pathway
shm00010
Glycolysis / Gluconeogenesis
shm00020
Citrate cycle (TCA cycle)
shm00620
Pyruvate metabolism
shm00785
Lipoic acid metabolism
shm01100
Metabolic pathways
shm01110
Biosynthesis of secondary metabolites
shm01120
Microbial metabolism in diverse environments
shm01200
Carbon metabolism
shm01210
2-Oxocarboxylic acid metabolism
Module
shm_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
shm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
Shewmr7_3599
00020 Citrate cycle (TCA cycle)
Shewmr7_3599
00620 Pyruvate metabolism
Shewmr7_3599
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Shewmr7_3599
Enzymes [BR:
shm01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.1 pyruvate dehydrogenase (acetyl-transferring)
Shewmr7_3599
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Gene cluster
GFIT
Motif
Pfam:
PDH_E1_M
Transketolase_C_1
Transketolase_N
TMP_3
Transketolase_C
Motif
Other DBs
NCBI-ProteinID:
ABI44579
UniProt:
Q0HQM6
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Position
complement(4278154..4280820)
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AA seq
888 aa
AA seq
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MSEDMLQDLDPLETQEWVDALQAVLEQEGPERAHFLLEKLIDKARRNGTHLPYTATTAYL
NTIPAGQEPHMPGNQEMERRIRAIIRWNALAMVLRGSKKDLELGGHISSFASSATIYDVC
FNHFFRAPNEKDGGDLVYFQGHIAPGIYARSFLEGRLTEDQLANFRQEVDGKGLSSYPHP
KLMPDYWQFPTVSMGLGPIQAIYQARFLKYLTDRGLKDCSDQTVYCFLGDGECDEPEALG
AIGLAAREELDNLVFIINCNLQRLDGPVRGNGKIIQELEGEFRGAGWEVVKVIWGRYWDP
LLARDTSGKLLQLMEETVDGEYQNCKAKGGAYTREHFFGKYPETAEMVANMSDDDIWRLN
RGGHDPVKVYAALDHARKTKGRPTVILAKTVKGYGLGDAGEGKNIAHNVKKMGIESIRYF
RDRFNIPIPDDQLEDLPFYHPGPDSEEVKYMMSRRAELHGSVPQRREKFSEELEIPSLKI
FDSILQGSNGREISSTMAFVRVLTALLKDKKIGKNIVPIIPDEARTFGMEGLFRQVGIYA
HEGQKYVPQDSDQVAYYREDKSGQVLQEGINELGAMSSWVSAATSYSVNDVPMIPFYIYY
SMFGFQRIGDMAWAAGDMRARGFLVGGTSGRTTLNGEGLQHQDGHSHVLANTIPNCITYD
PTYGYEIAVVVQDGIRRMYGENQEDIFYYLTTMNENYEQPAMPEGAEVGIVKGIYKLETV
AGSGKGKVQLMSCGTILEQTRKAAQALAKDFGITADVFSVTSFNELTRDGQAVERWNMLH
PTETPKQAYISQVISSDAPAIAATDYMKIYGEQLRAYMPTDYKVLGTDGFGRSDSRDNLR
HHFEVDAKFIVIAALKSLVDRKELPVDVLANAIKEYGIDADKINPQYA
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagatatgctacaagacttagatccgttagagactcaggaatgggttgacgcc
ctgcaagctgtattagaacaggaaggccctgagcgcgcccatttcttattagagaaactg
atcgataaagcccgtcgcaatggcacacacttgccttacactgcgaccacggcctatttg
aacaccattccagcgggtcaagagccgcacatgcctggcaaccaagagatggaacgtcgc
attcgcgccatcatccgttggaacgccttagctatggttctgcgtggttctaagaaagat
ttagagttaggcggccatatttcgagtttcgcgtcgagcgcaaccatttatgacgtgtgc
tttaaccacttcttccgtgcgccaaacgagaaagacggcggcgacttagtgtatttccaa
ggccatatcgctccaggtatctacgcgcgttcattcttggaaggtcgtttaactgaagac
caactggctaacttccgtcaagaagtggatggcaaaggtttatcttcttatccgcaccct
aagttgatgcctgactactggcaattcccaacggtttctatgggtctgggtccaatccaa
gcgatttaccaagcgcgcttcttaaaatacctgactgaccgtggcctgaaagattgttct
gatcaaaccgtttactgcttcttaggtgacggtgagtgtgacgagccagaagccttaggt
gctatcggtttagccgctcgtgaagaattagacaacctagtcttcatcatcaactgtaac
ctgcaacgtctggacggcccagtacgcggtaacggtaagattatccaagaactggaaggt
gaattccgcggcgctggctgggaagtggttaaagtgatttggggtcgttactgggatcca
ttattagcccgtgataccagcggtaagttactgcagttaatggaagaaaccgttgacggt
gaataccaaaactgtaaagccaaaggtggcgcttatactcgcgaacacttcttcggcaaa
tatccagaaaccgccgaaatggtagcgaacatgtcagatgatgacatttggcgcttaaac
cgtggtggtcatgacccagttaaagtgtacgcggcattagaccatgcgcgtaagactaaa
ggtcgtccaacagtgatcctagcgaaaaccgttaaaggttacggcctaggtgatgcgggt
gaaggtaagaacatcgcacacaacgtgaagaaaatgggtatcgagtctatccgttacttc
cgcgatcgtttcaatatccccattccagacgatcaattagaagatctgccgttctaccac
ccaggtccagattcggaagaagtgaagtacatgatgagccgtcgtgccgagctgcatggc
agcgtgccacaacgtcgtgagaagttcagcgaagagctggaaatcccatcactgaagatt
tttgactcgattctgcagggttctaacggccgtgaaatttcgtcaacgatggcgtttgtt
cgcgtgctgacagcactgttaaaagacaagaagattggcaaaaacatcgtgccaattatt
cctgacgaagcgcgtaccttcggtatggaaggtctgttccgtcaagtgggtatttatgct
cacgaaggccaaaaatacgttccgcaagactctgaccaagtggcttactaccgtgaagat
aagtcaggccaagtactgcaggaaggtattaacgaattaggtgctatgtcatcttgggta
tcggctgcgaccagctactcagtgaacgatgtgccaatgatcccattctacatctactac
tcaatgttcggtttccaacgtattggcgacatggcttgggcagcgggtgatatgcgtgct
cgcggcttcttagtcggtggtacttctggccgtacaaccttaaacggtgaaggtctacag
catcaggacggtcacagccacgtactggctaacaccattcctaactgtattacctacgat
ccaacttacggttatgaaattgccgttgtggtacaagatggtattcgtcgtatgtacggc
gagaaccaagaagatatcttctactacctgaccacaatgaacgaaaactacgagcagcca
gccatgccagaaggcgcagaagttggcatcgttaaaggtatctacaagttagaaaccgtt
gccggatcaggtaaaggcaaagttcaattaatgagctgtggcaccattcttgagcaaacc
cgcaaagcggctcaagcactggcaaaagacttcggtatcactgccgatgtattcagcgta
accagcttcaacgaactgactcgcgatggtcaagcggttgagcgttggaacatgctgcac
ccaactgaaacgccaaaacaagcgtatatcagccaagtgatctccagtgatgcgcctgca
atcgcagcgactgactacatgaagatctacggcgagcagttacgtgcatacatgccaacc
gattacaaagtgttaggtactgacggtttcggtcgttcagacagccgtgacaacctgcgt
caccacttcgaagtggacgctaagttcatcgttatcgcggcactgaagtcactggttgat
cgtaaagagctgcctgttgatgtgttagcgaatgccatcaaggaatacggcatcgacgct
gacaagatcaatccacagtacgcgtaa
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