Shewanella sp. ANA-3: Shewana3_3309
Help
Entry
Shewana3_3309 CDS
T00428
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumB
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
shn
Shewanella sp. ANA-3
Brite
KEGG Orthology (KO) [BR:
shn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shn03009
]
Shewana3_3309
Enzymes [BR:
shn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
Shewana3_3309
Ribosome biogenesis [BR:
shn03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Shewana3_3309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_15
Cons_hypoth95
Methyltransf_12
UPF0020
Motif
Other DBs
NCBI-ProteinID:
ABK49533
UniProt:
A0L0G4
LinkDB
All DBs
Position
1:complement(3971082..3972236)
Genome browser
AA seq
384 aa
AA seq
DB search
MSTLVQCGYFERGQCQSCRHIKLPMAQQLAAKNLELQQLLAPFVDKTEPQFLPPVVGDSS
GFRNKAKMVALGAAHAPVLGIVSPSGEAVSLCDCLLYPTDMQALLHRLERFVQQAGIPPY
RVDKAKGELKFILLTRSQVRGEYMLRFVLRSRDAIARIERELPTLMAEYPQIKVVSVNLQ
PVHMAILEGEEEIFLTENTRLEERFNDVPLFIRPKSFFQTNPQVAAKLYQTAREWVADFA
PASLWDLFCGVGGFGLHCAAKDIPLTGIEIEAEAIACAKMSAQLMGLDKVEFMALDSTDF
AKGEAAQTKPELIIVNPPRRGIGESLCHSLSEFAPKAILYSSCNPKTLAKDLGHIRGYRL
TKVQLFDLFPHSDHFEVLALLVKD
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
gtgagtacattagtacaatgtgggtattttgaacgaggccaatgccaatcctgtcgccat
attaagctccctatggcgcagcaactggcggccaaaaacctagaattgcagcaattgtta
gcgccttttgtcgataagaccgaaccgcaatttttaccaccggttgtgggtgacagcagc
ggttttcgtaacaaggcgaaaatggtcgccttgggcgcagcccatgcgcctgtgttgggg
attgttagtcccagcggcgaagcggtgagcctgtgtgactgcctgttgtatcctactgat
atgcaagccttactccaccgtttagagcgctttgtacagcaagcgggcattccgccttac
cgtgtcgataaggccaagggcgagcttaaatttatcctactgacgcgcagccaagtgcgt
ggcgagtatatgttgcggtttgtgctgcgctcgcgggatgccatcgcccgtatcgagcgt
gaattgcctacgctgatggccgaatatccgcagatcaaagtcgtatccgtcaatttgcaa
cctgttcatatggctatcttggagggtgaggaggagattttcctcactgaaaatactcgc
ctcgaagagcgctttaacgatgtgcctttgtttattcgtcccaagagcttttttcaaacc
aatccgcaggtggcggcaaagctgtaccaaaccgcccgtgagtgggtggccgacttcgcg
ccagcttccctttgggacttattctgtggtgtgggcggctttggtttgcactgtgcagct
aaagatatcccactgacagggattgaaattgaagccgaagccattgcctgcgctaagatg
tcggcgcagttgatgggattggataaagtagaatttatggcgctcgattccaccgacttt
gccaagggcgaggcggcgcaaactaagcctgagttgattattgtcaatccaccgcgccgc
gggattggtgagtccctgtgccattccttaagtgagtttgcgcctaaggcgattttgtat
tccagctgcaatcctaaaaccttagccaaagatctcggccatatccgtggctatcggtta
actaaggtgcagttattcgatctttttcctcactctgatcatttcgaagtgttagcctta
ttagtcaaagactaa
DBGET
integrated database retrieval system
