Shewanella sp. ANA-3: Shewana3_4046
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Entry
Shewana3_4046 CDS
T00428
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
shn
Shewanella sp. ANA-3
Pathway
shn01501
beta-Lactam resistance
shn01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
shn00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Shewana3_4046
01503 Cationic antimicrobial peptide (CAMP) resistance
Shewana3_4046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shn03036
]
Shewana3_4046
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shn02000
]
Shewana3_4046
01504 Antimicrobial resistance genes [BR:
shn01504
]
Shewana3_4046
Chromosome and associated proteins [BR:
shn03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Shewana3_4046
Transporters [BR:
shn02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Shewana3_4046
Antimicrobial resistance genes [BR:
shn01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Shewana3_4046
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND
HH_MFP_RND
RND-MFP_C
YknX_C
HH_EMRA
Beta-barrel_RND_2
HH_AAEA_pHBA
BSH_CusB
HH_CzcB
HH_CyaD
BSH_CzcB
HH_YBHG
GPS2_interact
DUF5801
Arabino_trans_N
Motif
Other DBs
NCBI-ProteinID:
ABK50263
LinkDB
All DBs
Position
1:complement(4861408..4862556)
Genome browser
AA seq
382 aa
AA seq
DB search
MRQTIKLASVISVALWMAACSPQEDKAAQAGAGPQSMEVGVINVAAKPQVIQVELPGRSK
AFLEAEVRPQVSGIVTKRSFVEGGHVKQGESLYQIDSAPYKAALVSANADLARANASLAS
AKAKAARYQQLVKTNAISKQDFDEAEAAYKEALASVTVAEAAINTAKINLEYTEVLAPIS
GRIGKSSVTAGALVTANQSQTLATIQQLDPINVDIAQSSAQLLRLKAKLQQGKLQAADNA
DVQLVLEDGTVYGHSGKLQFAEVSVDENTGSVILRAEFPNPDGLLLPGMYVRAVLNTGTD
PQAILVPQKAISRNAKGQAVAMVVNDQGVVEAKIVTTAEVIDNQWRITAGLEAGDKLIVE
GLQKIRPGAPVTPKVISETQAQ
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgcggcagacaattaaacttgcctcagtaatcagcgtggcgttgtggatggcagcttgt
agccctcaagaggataaggcagctcaagcaggcgctgggccgcagagtatggaagttggt
gtaatcaacgtggcggccaagcctcaggttatccaagtcgaattacccggccgcagcaag
gcgttcctcgaagccgaagtgcgtcctcaagtcagcggtattgttaccaagcgtagcttt
gtcgaaggcggtcatgtgaagcagggcgagtccctctatcaaatcgattccgcgccttac
aaggcagcactggtgagcgctaacgccgatttagccagagcgaatgcaagtcttgcttct
gctaaggccaaagcggcgcgttatcaacaattggtaaagactaacgctatcagtaagcaa
gatttcgatgaagccgaagcggcttacaaagaagcgctagcaagcgtgacagtcgctgaa
gcggcaatcaacaccgccaaaatcaacctcgaatacaccgaagtgttagcgccaatttct
ggccgtatcggtaaatcgagtgtgactgcgggtgcgctggtcacggcaaaccaaagccaa
acgctggcaaccattcaacagcttgatcctatcaatgtggatatcgcccaatcgagtgcc
caattgctgcgcctaaaagcgaaattacagcaaggcaagctgcaagcggctgataacgct
gacgtgcagttagtgcttgaagacggcactgtttatggccacagcggtaagctgcaattt
gctgaggtgagtgtggatgaaaacacgggctcagtgatcctgcgtgctgaattccctaac
ccagatggcctcttactgcctggcatgtatgttcgcgccgtgttgaatactggtaccgat
cctcaagctatcttagtgccacaaaaagccattagccgtaacgctaaggggcaagccgtg
gccatggtggtgaacgatcaaggcgtagtggaagcaaaaattgttactactgctgaagtt
atcgacaatcaatggcgtattactgccggtttggaagcgggcgataagttgattgtggaa
ggattacaaaaaatccgtccaggtgcaccagtcactcccaaagttatttctgaaacccaa
gcacaatag
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