Shewanella alkalitolerans: K0J45_05885
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Entry
K0J45_05885 CDS
T09228
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
shns
Shewanella alkalitolerans
Pathway
shns01501
beta-Lactam resistance
shns01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
shns00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
K0J45_05885
01503 Cationic antimicrobial peptide (CAMP) resistance
K0J45_05885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shns03036
]
K0J45_05885
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shns02000
]
K0J45_05885
01504 Antimicrobial resistance genes [BR:
shns01504
]
K0J45_05885
Chromosome and associated proteins [BR:
shns03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
K0J45_05885
Transporters [BR:
shns02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
K0J45_05885
Antimicrobial resistance genes [BR:
shns01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
K0J45_05885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
YknX_C
RND-MFP_C
BSH_RND
HH_MFP_RND
BSH_CzcB
Biotin_lipoyl
BSH_CusB
BSH_LcnD
BSH_YhbJ
Beta-barrel_RND
CzcB_C
HH_YBHG
BSH_YknX
Motif
Other DBs
NCBI-ProteinID:
QYJ98767
LinkDB
All DBs
Position
1324445..1325695
Genome browser
AA seq
416 aa
AA seq
DB search
MDKKYLYIPLGVLAIAALLTFAVAANQAKNQSSTSQPQVVNGKAANANTANVKAANANTA
NVKAGARAVPIASARVEAHEVAQHLSLVGKLAANRSVQIAAEVSGKVQAINLSDNQAVSQ
GQVLVHLEDAKAKANLAEAKAYLNDERRKLGEYKRLIEQHAITQTEIDAQLASVDIAEAR
LQAAQADLDYHTLKAPFDGVIGLVDFSLGKLVSVGSELVSLDDLSSMRLDLQIPERYLSQ
IYLGMPVVASSSAWPGAQFHGQVVAMAPRINPETLNLKVRVNFDNPSLQLRPGMLISARL
NFAPVTQAVVPVQALEYSGTKRFVYVIDGDNIARRTQVTLGARIDDQVLIDDGLSLGDRI
VVKGLVNMRDGIKVEDVETGQFAEGLGGRRLTQTQTQAQTQKQAQTGETDTARGQS
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaaatacctgtacattccccttggcgtgctggcgatagccgccttgctcacc
tttgccgttgctgccaatcaggccaagaatcagtcgtcaacatctcagccccaagttgta
aatggcaaagctgctaacgccaacacagctaatgtcaaagcagctaatgccaacacagct
aatgtcaaagctggggccagagccgtgccgattgccagtgcccgggtcgaggcccatgaa
gtggctcagcatctctctttggtgggcaagcttgccgccaatcgctcggtgcagatagct
gccgaggtatcgggtaaggtgcaggcgatcaacttaagcgacaatcaggcggtgtctcag
gggcaggtattggtgcatctcgaagatgccaaggccaaggcaaatcttgcagaggccaag
gcctatctgaacgatgagcggcgcaagttaggcgagtacaagcggctcatagaacaacac
gccattacccagaccgagatagatgctcagctggccagcgtcgatatcgccgaggccagg
ctccaggccgctcaggcggatctggattatcacaccctcaaggcccccttcgacggggtg
atcgggctggtggactttagtctgggcaagctggtgagtgtgggcagcgagctggtcagc
ctggacgatctctccagcatgcgtctggatctgcagatccccgagcgttatctgtcgcag
atctatctaggcatgccagtggtggccagcagcagcgcctggcccggcgcccagtttcat
ggtcaggtggtggccatggcgccgcggatcaatcccgagacccttaatcttaaggtgagg
gtgaattttgacaatcccagccttcagctcaggcccggcatgttgatctcggcgcggctt
aattttgcccctgtgactcaggcggtggtgccggtgcaggcgctggaatattcaggcacc
aaacgtttcgtctatgtgatcgatggcgacaatattgctcgccgcactcaggtgaccctg
ggggcgcgtatcgacgatcaggtgttgatcgatgatggcttatccttgggcgacagaatc
gtggtcaaggggctggtcaacatgcgtgatggcatcaaggtggaagacgttgaaactggc
cagttcgccgaggggctgggaggcaggcgtttgactcagacccagacacaggcccagact
cagaaacaggctcagacgggcgagactgacaccgcacgggggcagagctaa
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