Shewanella alkalitolerans: K0J45_09450
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Entry
K0J45_09450 CDS
T09228
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
shns
Shewanella alkalitolerans
Pathway
shns01501
beta-Lactam resistance
shns01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
shns00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
K0J45_09450
01503 Cationic antimicrobial peptide (CAMP) resistance
K0J45_09450
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shns02000
]
K0J45_09450
01504 Antimicrobial resistance genes [BR:
shns01504
]
K0J45_09450
Transporters [BR:
shns02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
K0J45_09450
Antimicrobial resistance genes [BR:
shns01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
K0J45_09450
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ACR_tran
MMPL
HTH_ENOX1
SecD_SecF_C
DUF6286
Motif
Other DBs
NCBI-ProteinID:
QYJ99392
LinkDB
All DBs
Position
2104140..2107268
Genome browser
AA seq
1042 aa
AA seq
DB search
MILTDLSVKRPVFASVISMLLIAFGLVSFDKLPLREYPNIDPPIVSVQTNYRGASAAVVE
SRITQLVEDRISGVEGIRNINSSSSDGRSSVTLEFDVGRDIEAAANDVRDRISGLLNNLP
EEADPPEVQKANGGDEVIMWLNLVSDQMNTLQLTDYARRYLVDRFSVIDGVANIRIGGGK
VYAMRVWIDRQALAARNLTVSDIESVLRSENVELPAGSVESQDRHFTVRLERTFKTAEDF
NNLVLAEGEDGYLIKLGDVARVEIGSEEERITFRGNREAMIGLGISKQSTSNTLEVARAA
NALVDKINPTLPAGMEIKRSYDSSVFIEASIKEVYQTLFIAMFLVIVVIYLFLGSVRAML
IPALTVPVSLMATFIVLYALGYTINLLTLLAMILAIGMVVDDAIVVLENIHRRIEEGDSP
LKAAYLGSREVAFAVVATTLVLVAVFMPITFLEGDLGKLFKEFAVAMSAAVIFSSLVALT
LSPMMCSKLLKPAGQDPWLVRKIDAGMNWLSTGYRATLKRAMVHPFIVSSLVVIALGLSG
YLMTKVPQEFAPQEDRGSMFLIVNGPQGASFEYISPYMDEIENRLMPLVDSGDIKRLLIR
APRGFGRSANFSNGMAIIVLEDWADRRSAFEIIGDIRARLSDLAGVRAFPVMRQAFGRGV
GKPVQFVLGGPSYEELAKWRDILLEKAKENPNLVGLDHDYQETKPQLRVVIDKDRAADLG
VSISHIGRTLESMLGSRLVTTFMRDGEEYDVIIEGNRDNQNTASDLSNIYVRSDRSRELI
PLANLVSVEEFADASQLNRYNRMRAITIEANLADGYSLGEALDYLNNLAYTYLPAEAVIS
YKGQSLDYQESGSSMYFVFLLALGIVFLVLAAQFESYIHPMVIMLTVPLATLGALIGLWV
TGQSLNIYSQIGIIMLVGLAAKNGILIVEFANQLRDKGIEFDTAIIQAASQRLRPILMTG
ITTAAGAIPLVLAQGAGAETRFVIGVVVLSGIILATFFTLLVIPVAYGLIARNTGSPEEI
SQRLEAELAQDQHHESGLRNAD
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgatcttgacggatttgtcggtaaaacgaccggtttttgcgtccgtcatcagcatgtta
ttaatcgccttcggtctggtctccttcgataaactccccctgagggagtaccccaatatc
gatccgccgatcgtctcggtgcaaaccaactatcgcggcgccagtgccgccgtggtggag
agtcgcattacccagctggtggaagacaggatcagcggcgtcgaagggatccgcaacatc
aactcctccagcagcgatggtcgctcatccgtaaccttagaattcgacgtcggccgtgat
atcgaggcggcggccaacgatgtccgtgatcgtatctcgggcctgctcaacaacctgccg
gaagaggccgatcccccagaggtgcagaaggccaatggcggtgatgaggtgatcatgtgg
ctcaacctggtctcggatcagatgaacaccttgcagctcaccgactatgcccgtcgttac
ctggtagatcgcttctctgtgatcgatggtgtggcaaatattcgtatcggtggcggtaag
gtgtatgccatgcgggtgtggatcgacaggcaggctctggcggcccgtaacctgacggta
tcggatatcgaatctgtgctgcgctcagaaaacgtcgagctgccggccggctcggtggaa
tctcaggacagacacttcaccgtgcgtctagagcgtaccttcaagacggcggaagatttt
aacaatctggtgctggccgaaggggaagatggttacctcatcaagctaggtgacgtggcc
agggtagagattggctcggaagaggagcgtattaccttccgcggtaaccgcgaggccatg
attggccttgggatctccaagcagtcgacctccaacaccctggaagtggcccgcgccgcc
aacgccctggtggataagatcaatccgacactgcctgccggcatggagatcaaacgctcc
tacgacagctcggtgtttatcgaggcctctatcaaggaggtgtatcagaccctgtttatc
gccatgttcctggtgattgtggtgatctatctcttccttggcagcgtgcgcgccatgttg
atcccggcgttgactgtaccagtctccctgatggcgacctttatcgtgctctacgccttg
ggttacaccattaacctgctgaccctgctggcgatgattctggctatcggtatggtggtg
gatgatgccatcgtggtgctggaaaacatccacagacgcattgaggagggcgactcgccc
ctcaaggcggcctacttaggttctcgcgaggtggcctttgccgtggtggcgaccaccctg
gtattggtggccgtgtttatgccgatcaccttcttagagggagatctgggtaaactcttt
aaggagtttgcggtggccatgagcgccgcggtgatcttctctagtctggtggccctgacc
ctaagccccatgatgtgctctaagctgcttaagcctgccgggcaagatccttggctggtg
cgcaagatagatgcgggcatgaactggctgtcgaccggttaccgtgcgacgcttaagcgc
gccatggtccacccctttatcgtcagctcgctggtggttatcgccttagggcttagcggc
tatctgatgactaaggtgccgcaggagtttgcaccgcaggaggatcggggatctatgttc
ctgatcgtcaacggtcctcagggagcaagcttcgagtatatcagcccctacatggatgaa
attgaaaatcgcctgatgcccctggtggacagtggtgacatcaagcgtctgcttattcgt
gcgccgcgcggctttggtcgcagcgccaacttttctaacggcatggcgatcatcgtgctg
gaagactgggcggaccgtcgcagtgcctttgagatcattggtgacattcgtgcccgtctg
tcggatctcgccggtgtgcgcgccttccccgtaatgcgtcaggctttcggccgcggggtg
ggtaagccggtgcagtttgtgcttggaggcccaagctatgaagaactcgccaagtggcgt
gacatcttgttggagaaggccaaggagaatcctaacctggtcggcctggatcacgactat
caggagactaagcctcaactgagggtggtgatcgacaaagacagggcggcggaccttggg
gtctctatctcgcacattggccgcacgctcgagtctatgctgggctcgcgtttggtgacc
acctttatgcgtgacggcgaagagtatgacgtgatcatcgagggtaaccgggataatcag
aatactgccagcgatctgagtaacatctatgtgcgctcggaccgcagccgtgagctgatc
ccgctggctaacctggtctcggtagaggagtttgccgatgccagccagttaaaccgctac
aaccgtatgcgcgccattaccatagaggccaacctggccgatggttatagcttgggtgag
gcgctagattaccttaacaatctggcctacacctatctgccggccgaggcggtaatcagc
tacaaggggcagtctctggactatcaggagtctggcagctcgatgtatttcgtcttccta
ctggcgctgggtatcgtcttcttggtactcgcggcccagttcgagagctatattcaccct
atggtgatcatgctgaccgtacctcttgccaccttgggcgccctaatcggactctgggtg
acaggccagagcctgaacatctatagccagataggcatcatcatgctagtggggctggcg
gccaagaatggtatcttgatcgtcgaatttgccaaccagctgcgggataaagggatcgaa
ttcgacactgcgatcatccaggcggcaagccagcgtcttcgtcctatcctgatgacgggg
atcaccacggcggcgggggccattccgctggtgttggcccaaggtgcaggcgccgagaca
cgcttcgtgattggtgtggtggtcttgtcgggtatcatactggcgaccttctttacgctg
ctggtgatccctgtggcctatggcctgatcgccagaaataccggttcgccggaggagatc
agtcagcgactggaggccgaactagcacaagatcaacatcacgagtcaggcctgagaaat
gccgactag
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