Sturnira hondurensis: 118983180 Help Entry 118983180         CDS       T07222                                  Symbol TRAF6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism shon  Sturnira hondurensis Pathway shon04010   MAPK signaling pathway shon04064   NF-kappa B signaling pathway shon04120   Ubiquitin mediated proteolysis shon04140   Autophagy - animal shon04144   Endocytosis shon04380   Osteoclast differentiation shon04620   Toll-like receptor signaling pathway shon04621   NOD-like receptor signaling pathway shon04622   RIG-I-like receptor signaling pathway shon04657   IL-17 signaling pathway shon04722   Neurotrophin signaling pathway shon04936   Alcoholic liver disease shon05132   Salmonella infection shon05133   Pertussis shon05135   Yersinia infection shon05140   Leishmaniasis shon05142   Chagas disease shon05145   Toxoplasmosis shon05152   Tuberculosis shon05160   Hepatitis C shon05161   Hepatitis B shon05162   Measles shon05168   Herpes simplex virus 1 infection shon05169   Epstein-Barr virus infection shon05170   Human immunodeficiency virus 1 infection shon05171   Coronavirus disease - COVID-19 shon05200   Pathways in cancer shon05222   Small cell lung cancer shon05235   PD-L1 expression and PD-1 checkpoint pathway in cancer shon05417   Lipid and atherosclerosis Brite KEGG Orthology (KO) [BR:shon00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     118983180 (TRAF6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     118983180 (TRAF6)    04064 NF-kappa B signaling pathway     118983180 (TRAF6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     118983180 (TRAF6)    04140 Autophagy - animal     118983180 (TRAF6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     118983180 (TRAF6)    04621 NOD-like receptor signaling pathway     118983180 (TRAF6)    04622 RIG-I-like receptor signaling pathway     118983180 (TRAF6)    04657 IL-17 signaling pathway     118983180 (TRAF6)   09156 Nervous system    04722 Neurotrophin signaling pathway     118983180 (TRAF6)   09158 Development and regeneration    04380 Osteoclast differentiation     118983180 (TRAF6)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     118983180 (TRAF6)    05235 PD-L1 expression and PD-1 checkpoint pathway in cancer     118983180 (TRAF6)   09162 Cancer: specific types    05222 Small cell lung cancer     118983180 (TRAF6)   09172 Infectious disease: viral    05170 Human immunodeficiency virus 1 infection     118983180 (TRAF6)    05161 Hepatitis B     118983180 (TRAF6)    05160 Hepatitis C     118983180 (TRAF6)    05171 Coronavirus disease - COVID-19     118983180 (TRAF6)    05162 Measles     118983180 (TRAF6)    05168 Herpes simplex virus 1 infection     118983180 (TRAF6)    05169 Epstein-Barr virus infection     118983180 (TRAF6)   09171 Infectious disease: bacterial    05132 Salmonella infection     118983180 (TRAF6)    05135 Yersinia infection     118983180 (TRAF6)    05133 Pertussis     118983180 (TRAF6)    05152 Tuberculosis     118983180 (TRAF6)   09174 Infectious disease: parasitic    05145 Toxoplasmosis     118983180 (TRAF6)    05140 Leishmaniasis     118983180 (TRAF6)    05142 Chagas disease     118983180 (TRAF6)   09166 Cardiovascular disease    05417 Lipid and atherosclerosis     118983180 (TRAF6)   09167 Endocrine and metabolic disease    04936 Alcoholic liver disease     118983180 (TRAF6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:shon04131]     118983180 (TRAF6)    04121 Ubiquitin system [BR:shon04121]     118983180 (TRAF6) Enzymes [BR:shon01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      118983180 (TRAF6) Membrane trafficking [BR:shon04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     118983180 (TRAF6) Ubiquitin system [BR:shon04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     118983180 (TRAF6) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF TRAF6_Z2 zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 zf-RING_5 zf-TRAF_2 Sina_ZnF SlyX TRAF3_RING zf-RING_11 RING_XB3-XBAT31 Spc29 U-box DUF3450 DUF4455 ATG16 Filament DUF16 DUF7607 EzrA Myosin_tail_1 Med21 DUF7310 UPF0242 DUF1664 Motif Other DBs NCBI-GeneID:  118983180 NCBI-ProteinID:  XP_036896424 LinkDB All DBs Position Unknown AA seq 541 aa AA seqDB search MSLLNCEDSCVSSQSESDCCAAMASACSAAAKDDSVSGNASTGTLSSSFMEEIQGYDVEF DPPLESKYECPICLMALREAVQTPCGHRFCKACITKSIRDAGHKCPVDNEILLETQLFPD NFAKREILSLTVKCPNAGCLHKMELRHLEDHQAHCEFALMNCPQCHRPFQKCHLNIHILQ ECPRRQVSCINCAVSMAFEDKEIHDQNCPLANVVCEYCNTMLIREQMPNHFDLDCPTAPI PCTFSTFGCNEKMQRIHLARHLQENTQSHMRMLAQAVQSLNLAVAPRPQRDVLLYESSSL PRASSGCHPEVQNFQETIQQLESRLVRQDHQIRELTAKMETQSIYVSELKRTIRTLEDKV AEIEAQQCNGIYIWKIGNFGMHLKSQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPTAQ RCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILDQSEAPIRQNHEEIMDAKPELLAFQR PTIPRNPKGFGYVTFMHLEALRQRTFIKDDTLLVRCEVTTRFDMGSLRREGFQPRSSDAG V NT seq 1626 nt NT seq  +upstreamnt  +downstreamnt atgagtctgttaaactgtgaggacagctgtgtgtccagccagtctgagagtgactgctgc gcggccatggccagtgcctgcagtgccgcagccaaagacgacagcgtgagtgggaacgcc agcacagggactctctccagctctttcatggaagagatccagggctacgacgtggagttt gacccgcccctggagagcaagtacgagtgccccatctgcctgatggccttacgggaagca gtgcaaacaccctgcggccacaggttctgcaaagcctgcatcaccaaatcaataagggat gcaggtcacaagtgtccagttgataatgaaatactcctggaaactcaactgttccctgac aattttgcaaaacgggagattctttctctgacggtgaagtgtccaaatgcaggttgtttg cacaagatggaactgagacatcttgaggatcatcaagcacattgtgagtttgctcttatg aattgtccccaatgccaccgtcccttccaaaagtgccaccttaatattcacattctccag gagtgtccaaggagacaggtttcatgtataaactgtgctgtgtcgatggcatttgaagat aaagagatccatgaccagaactgtcctttggccaatgtcgtctgtgaatactgcaatacc atgctcatcagagaacagatgcctaatcattttgatctagactgtcccacagccccaatt ccgtgcacattcagtacttttggttgcaatgaaaagatgcagaggattcacttggcacgc cacctacaggagaatactcagtcacacatgagaatgttggcccaggctgttcagagttta aacctcgctgtggctccccggcctcagcgtgacgtgctcctgtatgagtcttcctctctg ccccgggcctcctctgggtgtcacccagaggtccagaatttccaagaaaccattcaacaa ttagagagtcgccttgtaagacaagatcatcaaatccgggagctgactgcgaagatggaa actcagagcatatatgtaagtgagctcaaacgaactattcgaacccttgaggacaaagtt gctgaaatagaagcacagcagtgcaatgggatttacatctggaagatcggtaacttcggg atgcacttgaaatctcaagaagaggagaaacctgttgtcattcatagccctggattctac acgggcaaacctggctacaaactctgcatgcgcctgcaccttcagttgcccacggctcag cgctgtgcgaactacatatccctctttgtccacacaatgcaaggagagtatgacagccac ctcccctggcctttccagggtacaatacgcctcacaattcttgatcagtctgaagcacct ataaggcaaaaccatgaggagataatggatgctaaaccagagctgcttgccttccagagg cccacaatcccacggaacccaaaaggttttggctatgtgacttttatgcatctggaagcc ctaagacaaagaaccttcattaaggatgatactttactggtacgctgtgaggtcactact cgttttgacatgggtagcctccgaagggagggctttcagccacggagtagtgacgcaggc gtatag

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