Sarcophilus harrisii (Tasmanian devil): 100913227
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Entry
100913227 CDS
T02286
Symbol
IFT122
Name
(RefSeq) intraflagellar transport protein 122 homolog isoform X3
KO
K19656
intraflagellar transport protein 122
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
shr03037
]
100913227 (IFT122)
Cilium and associated proteins [BR:
shr03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
100913227 (IFT122)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_IFT122_1st
Beta-prop_IFT122_2nd
Zn_ribbon_IFT122
Zn_ribbon_IFT122_C
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
EIF3I
ANAPC4_WD40
WDR55
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_CAF1B_HIR1
TPR_GEMI5
TPR_IF140-IFT172
Beta-prop_NUP159_NUP214
WD40_MABP1-WDR62_2nd
Beta-prop_WDR35_TULP_N
TPR_IFT80_172
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_Vps41
Beta-prop_IFT140_1st
eIF2A
WDR90_beta-prop_4th
Beta-prop_HPS5
B-prop_COPA_B_2nd
WD40_MABP1-WDR62_1st
TPR_7
TPR_COPA_B
Beta-prop_IFT140_2nd
Beta-prop_WDR75_1st
Beta-prop_SPT8
TTC7_N
Motif
Other DBs
NCBI-GeneID:
100913227
NCBI-ProteinID:
XP_012399105
Ensembl:
ENSSHAG00000013078
UniProt:
A0A7N4UXB1
LinkDB
All DBs
Position
1:53289208..53357398
Genome browser
AA seq
1184 aa
AA seq
DB search
MRAVLTWRDKAEQCIYDLAFKPDGTQLILAAGNRLLVYDTSDGTLIQPLKGHKDTVYCVA
YAKDGKRFASGSADKSVIIWTAKLEGILKYTHNDSIQCVSYNPVTHQLASCSSNDFGLWS
PEQKSVSKHKSNSKITCCSWTNDGQYIALGMFNGIISIRNKNGEEKVKIERPGGALSPIW
SICWNPSRDEHNDILAVADWGQKLSFYQLSGKQVGKDRLLNFDPCCISYFTKGEYILLGG
SDKQVSLFTKDGVRLGTIGDQNSWVWTCKVKPDSNYVVIGCQDGTISFYQLIFSTVHGLY
KDRYAYRDSMTDVIVQHLITEQKVRIKCKELVKKIAIYKNRLAIQLPERILIYELYSDDS
SDMHYRVKEKIVKKFECNLLVVCSDHIILCQEKRLQCLSFGGVKEREWQMESLIRYIKVI
GGPPGREGLLVGLKNGQILKIFVDNLFAIVLLKQATAVRCLDMSASRNKLAVVDENDTCL
VYDIHTKELLFQEPNANSVAWNTQCEDMLCFSGGGYLNIKASNFPVHQQKLQGFVVGYNG
SKIFCLHVFSMSAVEVPQSAPMYQYLDRKMYKEAYQIACLGVTDADWRELAMEALEGLEF
ETAKKSFTRVQDLRYLELINSIEERKKRGETNNELFLADVFAYQGKFHEAAKLYKRSGHE
NLALDMYTDLRMFEYAKDFLGSGDPKETKMLITKQADWARNINEPKAAVEMYLSAGEHIK
AIEISGDHGWVDMLIDIARKLDKAERVPLLLCAQYFKKLDNPGYAAETYLKIGDLKSLVQ
LHVETQRWDEAFALGEKHPEFKDDVYVPYAQWLAENDRFEEAQKAFHKAGRQGEAVRVLE
QLTHNAVVESRFNDAAYYYWMLSMQCLDIAQADQSQKEEMLVKFHHFQHLAELYHVYHSI
QRYTEEPFSFHLPETLFNISRFLLHSLSKETPLGISKVNTLFTLAKQSKALGAYKLARHA
YDKLQGLQIPARFQKSIELGSLTIRSKPFHDSEELVPLCYRCSTNNPLLNNLGNVCINCR
QPFVFSASSYEVLHLVEFYLEEGITDEEAVALIDLEAPRLIKKERKWQEITNSNSQTLRL
DETVEHIEEDDPFTAKLSFEQGGSEFVPVVVNRAVLRSMSRRDVLIKRWPKPLQWQYFRS
LLPDASITMCPSCFQMFHSEDYELLVLQHNCCPYCRRRIDEPNQ
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgagggccgtgctgacctggagagataaggcggagcagtgtatatatgaccttgcattt
aagcccgacggaactcagctgattttggctgcaggaaacagattactggtttacgacact
tctgatgggaccttaattcagccgctgaaaggacacaaggacacagtgtattgtgtggcc
tatgctaaggatggcaagcgttttgcttctggatcagctgacaaaagtgttatcatctgg
acagcaaaactggaaggtattctgaaatacacacacaatgattccatacaatgcgtctcc
tacaaccctgttacccaccagttggcatcttgttcctccaatgactttggattgtggtct
cctgagcagaagtctgtctctaaacataaatcaaacagcaaaattacctgctgcagctgg
acaaatgatggtcagtacattgctctggggatgttcaatggcatcatcagcatccggaat
aaaaatggggaggagaaggtgaagattgagcggccaggaggagctctgtcccctatctgg
tccatctgctggaacccttccagagatgaacataatgacatcctggctgtggctgactgg
gggcagaaactctccttttaccaactgagtggcaaacaggttgggaaggataggttactg
aactttgatccctgctgcattagctattttaccaaaggagaatatattttgcttggagga
tcagacaaacaagtctctctcttcaccaaagatggagtgcgccttgggactataggggat
cagaattcctgggtgtggacgtgtaaagttaaaccggattccaattacgtggtgattggc
tgccaggatgggacaatttccttctatcagctcatttttagcacagtgcacgggctctat
aaggatcgttacgcctacagggacagcatgacggatgtgattgtccagcacctgatcacg
gagcagaaagttcggatcaagtgcaaagagctggtgaagaagatcgccatctacaaaaac
cggctggccattcagctgcccgaaagaatcctgatctatgagttgtactcggatgactcc
tcagacatgcattaccgagttaaggaaaagatcgtcaagaaatttgagtgcaacctcctg
gtggtgtgctccgatcacatcatcctctgccaggagaaaaggctgcagtgtttgtctttt
ggaggggtgaaagaaagggagtggcagatggaatccctcatccgttacatcaaggtgatc
gggggccctcctggaagagaaggccttctagttggcctgaagaacggccagatcctaaag
atttttgtggacaatctgtttgccatcgtcctgctcaagcaggccacggccgtgcggtgc
ttggacatgagtgcatcccgaaacaagctagccgtggtggatgaaaacgatacttgcctg
gtgtatgatattcacaccaaggaactgctttttcaggaaccaaatgctaacagtgtggcc
tggaacactcagtgcgaggacatgctctgcttctctggaggtggctatctcaacatcaaa
gccagcaacttcccggtgcaccagcagaagctccagggcttcgtcgtgggctacaatggc
tcaaagatcttctgtctccacgttttctccatgtcagcagtagaagtgccccagtctgcc
ccaatgtaccagtacctggacaggaagatgtacaaagaagcctaccagattgcttgttta
ggtgtgactgatgcagattggagagagctggccatggaggctttggaaggactggaattc
gaaacagctaagaagtcatttaccagagtacaagatctccgatatttagaactgatcaac
agcattgaggagaggaagaagcgtggagagaccaacaatgagctgtttctagcagatgtt
tttgcctaccaaggaaagttccacgaggctgctaaactgtacaagcgcagtgggcacgag
aacctggctttggacatgtacactgacctgcgcatgtttgaatacgccaaggatttcctt
ggatctggagaccccaaagaaaccaagatgttgatcaccaaacaggctgactgggccaga
aacatcaacgaacccaaagccgcggtggagatgtacctctcggcgggggagcacatcaag
gccatagagatcagtggcgatcacggctgggtggacatgttaattgatatcgcccggaaa
ctggacaaggcggaacgggtgcccctgctgctgtgtgcacagtacttcaagaagctggac
aaccccggctacgcggctgagacctacctgaagattggggacctgaagtccctggtgcag
cttcacgtagagactcagcgctgggatgaggcctttgctttgggtgagaagcatcctgag
tttaaggatgatgtctatgtgccctatgcccagtggttggcagaaaatgatcgcttcgaa
gaggcccagaaagcgttccacaaagctggccgtcagggcgaggcagtcagagtgttggaa
cagctcactcacaatgctgtggtcgaaagcagatttaatgacgcagcgtattattactgg
atgctgtccatgcagtgtcttgatatagctcaagcagaccaaagccagaaggaggagatg
ctggtcaagtttcaccacttccagcacttggccgagctgtaccacgtgtatcactctatt
cagcgctatacggaggagcccttcagttttcatcttcctgaaaccctcttcaacatctcc
agattcctgctccatagtttgtctaaggagacacccttgggtatctctaaagtaaacacg
ctgttcaccctggccaagcagagcaaggccctgggtgcctacaagctggctcgccatgcc
tatgacaaactgcagggcctgcagatccccgccaggttccagaaatccatcgagctgggc
agcctgacgatccgctccaagcccttccacgacagtgaggagctcgtgcccttgtgttat
aggtgctcgaccaacaaccctctgctcaacaatttggggaacgtgtgcatcaactgccgg
cagccctttgtcttctcggcctcgtcgtatgaggttttgcatctggtggaattttacctg
gaggaaggaattactgatgaagaagctgtggctctcattgatttggaggcccccaggtta
atcaagaaggagagaaaatggcaagaaataaccaactctaattcacagactttgagacta
gacgagactgtggagcacattgaggaggacgaccctttcactgccaagctgagttttgag
caagggggctccgaatttgttcctgtggtggtgaaccgggcggtcctgcggtccatgagc
aggcgggacgtgctcattaagcgctggcccaagccactgcagtggcagtacttccgctcc
ctcctccccgatgcttccatcaccatgtgcccctcatgcttccagatgtttcactcagaa
gattatgagcttctggtgcttcaacacaactgctgtccatactgtcggaggcgtatcgac
gaaccgaatcagtga
DBGET
integrated database retrieval system
