Sarcophilus harrisii (Tasmanian devil): 100916712
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Entry
100916712 CDS
T02286
Name
(RefSeq) LOW QUALITY PROTEIN: actin, cytoplasmic 2
KO
K05692
actin beta/gamma 1
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03082
ATP-dependent chromatin remodeling
shr04015
Rap1 signaling pathway
shr04145
Phagosome
shr04210
Apoptosis
shr04390
Hippo signaling pathway
shr04510
Focal adhesion
shr04520
Adherens junction
shr04530
Tight junction
shr04611
Platelet activation
shr04613
Neutrophil extracellular trap formation
shr04670
Leukocyte transendothelial migration
shr04714
Thermogenesis
shr04810
Regulation of actin cytoskeleton
shr04814
Motor proteins
shr04820
Cytoskeleton in muscle cells
shr04919
Thyroid hormone signaling pathway
shr04921
Oxytocin signaling pathway
shr04971
Gastric acid secretion
shr05014
Amyotrophic lateral sclerosis
shr05100
Bacterial invasion of epithelial cells
shr05132
Salmonella infection
shr05135
Yersinia infection
shr05164
Influenza A
shr05205
Proteoglycans in cancer
shr05225
Hepatocellular carcinoma
shr05410
Hypertrophic cardiomyopathy
shr05412
Arrhythmogenic right ventricular cardiomyopathy
shr05414
Dilated cardiomyopathy
shr05416
Viral myocarditis
shr05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100916712
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
100916712
04390 Hippo signaling pathway
100916712
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100916712
09143 Cell growth and death
04210 Apoptosis
100916712
09144 Cellular community - eukaryotes
04510 Focal adhesion
100916712
04520 Adherens junction
100916712
04530 Tight junction
100916712
09142 Cell motility
04814 Motor proteins
100916712
04820 Cytoskeleton in muscle cells
100916712
04810 Regulation of actin cytoskeleton
100916712
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
100916712
04613 Neutrophil extracellular trap formation
100916712
04670 Leukocyte transendothelial migration
100916712
09152 Endocrine system
04921 Oxytocin signaling pathway
100916712
04919 Thyroid hormone signaling pathway
100916712
09154 Digestive system
04971 Gastric acid secretion
100916712
09159 Environmental adaptation
04714 Thermogenesis
100916712
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
100916712
09162 Cancer: specific types
05225 Hepatocellular carcinoma
100916712
09172 Infectious disease: viral
05164 Influenza A
100916712
09171 Infectious disease: bacterial
05132 Salmonella infection
100916712
05135 Yersinia infection
100916712
05100 Bacterial invasion of epithelial cells
100916712
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100916712
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
100916712
05410 Hypertrophic cardiomyopathy
100916712
05412 Arrhythmogenic right ventricular cardiomyopathy
100916712
05414 Dilated cardiomyopathy
100916712
05416 Viral myocarditis
100916712
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shr03021
]
100916712
03019 Messenger RNA biogenesis [BR:
shr03019
]
100916712
03036 Chromosome and associated proteins [BR:
shr03036
]
100916712
03029 Mitochondrial biogenesis [BR:
shr03029
]
100916712
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
shr04812
]
100916712
04147 Exosome [BR:
shr04147
]
100916712
Transcription machinery [BR:
shr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100916712
Messenger RNA biogenesis [BR:
shr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
100916712
Chromosome and associated proteins [BR:
shr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
100916712
NuA4 complex
100916712
Chromatin remodeling factors
BAF complex
100916712
PBAF complex
100916712
GBAF(ncBAF) complex
100916712
SWR1 complex
100916712
Mitochondrial biogenesis [BR:
shr03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
100916712
Cytoskeleton proteins [BR:
shr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
100916712
Exosome [BR:
shr04147
]
Exosomal proteins
Proteins found in most exosomes
100916712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
100916712
NCBI-ProteinID:
XP_012399891
Ensembl:
ENSSHAG00000000010
LinkDB
All DBs
Position
3:254912418..254914509
Genome browser
AA seq
375 aa
AA seq
DB search
MEEEIVALVIDNGSGMCKAGFAGDDAPRAVFPSIVGCPRHQGVMVGMGQKDSYVGDEAXS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFNNELRVAPEEHPILLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEVYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVHDIKEKLCYVALDFEQEMATAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
AGTTMYPGIVDRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILGSLSTFQQMWISKQ
EYDESGPSIVHRKYF
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagaaattgttgctcttgtcattgacaatggctctggtatgtgcaaagctggc
tttgctggggatgatgctcctcgagctgtgttcccctccattgttggatgcccaagacat
cagggtgtcatggtaggaatggggcagaaggacagttatgttggtgatgaagcctagagc
aagagaggtatcctgactctgaaatatcccattgaacatggcattgttaccaactgggat
gacatggagaaaatctggcatcataccttcaacaatgagcttcgtgtagcccctgaggaa
caccctattttgcttacagaagcacccttgaaccccaaggccaacagagagaagatgaca
cagatcatgtttgagaccttcaacaccccagccatgtatgttgcaattcaggctgtgttg
tctctgtatgcctctggtcgtaccactggtattgttatggactctggtgatggtgtcacc
cacactgtgcccatctacgaggtttatgcccttccccatgccatccttcgtctggatttg
gctggccgtgacttgacagactacctcatgaagatactgacagaaagaggatacagcttc
actactacagctgaaagggaaattgtccatgacatcaaggagaagctgtgctacgttgcc
ctggactttgagcaggagatggccactgctgcttcatcctcttctctggagaagagctat
gagcttcctgatggccaggtgatcaccattggcaatgagaggttcaggtgtccagaggcc
ctcttccagccatccttcctgggtatggaatcctgtggcattcatgagaccactttcaat
tccatcatgaagtgtgatgttgacatccgaaaggatctgtatgccaacacagtattgtct
gctggtactaccatgtaccctggtattgttgacagaatgcagaaagaaatcacagccctg
gcccctagcacaatgaaaattaagatcattgcccctcctgaacgtaagtattccgtctgg
attggtggttctattctgggatctctgtccaccttccagcagatgtggatcagcaagcag
gaatatgatgaatctggcccatccattgtccatcgcaaatacttctaa
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integrated database retrieval system
