Sarcophilus harrisii (Tasmanian devil): 100918685
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Entry
100918685 CDS
T02286
Symbol
NPC1L1
Name
(RefSeq) NPC1-like intracellular cholesterol transporter 1
KO
K14461
Niemann-Pick C1-like protein 1
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04975
Fat digestion and absorption
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09150 Organismal Systems
09154 Digestive system
04975 Fat digestion and absorption
100918685 (NPC1L1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shr02000
]
100918685 (NPC1L1)
Transporters [BR:
shr02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
100918685 (NPC1L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NPC1_N
NPC1_MLD
Sterol-sensing
Patched
MMPL
KRE1
GCSF
Motif
Other DBs
NCBI-GeneID:
100918685
NCBI-ProteinID:
XP_003757816
Ensembl:
ENSSHAG00000016456
UniProt:
G3WVB8
LinkDB
All DBs
Position
2:219595027..219639810
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AA seq
1332 aa
AA seq
DB search
MAKPGLKELLLLVVLLHLVRAKYYTPVHEAGRCAFYDDCGKNPELSGGLLPLPNVSCLSN
TPARKLTGDHLQLLKSICPRLYEGPDSTFACCSPKQLIALQNSLKVPKVLLSRCPACVEN
FASLHCQNTCSSNQSLFINVTRIVPIEGTNLSKVVAYQAFYKQSFAERTYNSCSKVQVPA
TGSLAIGTMCGVYGSDLCNAQRWLNFQGDTGNGVAPLEIAFHLLQPGQLPGSGIEALDAE
MWNCNETRGNDSNACSCQDCALACPAIAHPPMQDSTFRLGRMHSGLALAIILCCAFVSFF
TFLTVHSCLRRKERKPKKATGCSNQFSHFSHIVLGNLFQSWGTWVASWPKLVLFLSTVLV
VGLASGLVFLKLTTDPVELWSNPNSQARREKEFHDRYFGPFFRTNQVILTAPSQPGYTYD
SLLLGPKNFSGILREELLLQLLELQEELRHLEVWSEEEQRNISLRDICYAPLQPHNPRLE
DCCINSFLQYFQSNRTNFLLTANQTLMGKTAEINWRDHFLYCVNSPLTFKDGTSLALSCM
ADYGAPVFPFLAVGGYSGQDFSDAEALILTFSLNNYPAGDPRLAQTRLWESHFLKVMKDF
KIRTAGTFEVTFMAERSLEDEINRTTAEDLPIFAISYAIVFLYITLALGRYTSCSRVLVD
SKVTLGLGGVLVVLGSVLASMGFFSYVGIPSSMVIIQVVPFLVLAVGADNIFIFVLEYQR
LPRLPGEQREMHIGRVLGSVAPSMLLCSLSEAICFFLGALTQMPAVRTFALTAGLAIILD
FLLQMSAFVALLSLDSKRQEASHMDICCCVGTNEVPPSGDGEGLLLRFFRKFYAPFLLHG
FTRVIVLVLFMALFGVSLYFMCQINVGLDQELALPEDSYLLNYFLFLNRYLEIGVPVYFV
TTSGYNFSSTDGTNAICSSSGCNPFSLTQKIQYATKFPKESYLAIPASSWVDDFIDWLSP
LSDCCRLYNNNGTFCPSTTTTAFFTCLRKCISKTRPTEAQFHKYLPWFLEDRANINCPKG
GLGAYDSSVNISADGKILATRFMAYHTPLKNSQDYTEALRAARELAVNITADLRTVPGTD
PNFEVFPYTITYVFYEQYLTIVPEGLFILSLCIIPTFVVCCLLLGMDLRSGFLNLFSIIM
ILVDTVGFMTLWGISYNAVALINLVTAVGISVEFVSHITRSFAVSTKPTRLERAKEATVI
MGSAVFAGVAMTNLPGIIILAFAKAQLIQIFFFRLNLLITIFGMLHGLIFLPVILSYFGP
DVKPILVLAQQQTEENTMANKENKSEAATAASCSKSPPSFSSNLNSYINSNFKNDVTEFP
SGTKELEPTTPL
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcctgggctgaaggaattgctgctcttggtggtcctcttgcatttggtccgt
gcaaagtactacacccctgtccacgaagctggcaggtgtgccttctatgatgattgtggg
aaaaaccctgaattatccggcggtctcctccccctgcccaacgtgtcttgcttatccaac
accccggcccgcaaactcactggggaccacctgcagctcttgaagagcatctgcccccgg
ctgtatgaaggccctgactccacttttgcctgctgctcccccaaacagctgattgctctg
cagaacagcctgaaagtgcccaaggtgctgctttcccgctgcccggcttgtgttgagaac
tttgccagcttgcactgccaaaacacctgcagctccaaccagagtcttttcatcaatgtg
actcgcattgttcccatcgaagggactaacctctccaaggtggtagcctatcaggctttc
tacaaacagagttttgcagagcggacctacaattcctgcagcaaggtgcaagtccctgcc
acgggtagcctggccatcggcactatgtgcggggtgtatggctccgacctctgtaatgcc
cagcgttggctcaatttccagggcgacacaggaaatggagtcgctcccctggaaatcgcc
tttcatctcctgcagcctggccagctccccgggagtgggatagaagccctggatgcagaa
atgtggaactgcaatgagactcggggcaacgattccaatgcttgctcttgccaggactgt
gctttggcctgtcctgccatcgcccaccctcccatgcaggactccaccttccgcctgggg
aggatgcacagcgggttggccctggcgatcatcctctgctgcgcctttgtttctttcttc
actttccttacggttcattcctgcctcagaagaaaggagcggaagcccaagaaggccaca
ggttgctccaaccaattcagtcacttttcccacatcgtcctgggcaacctcttccaaagc
tggggcacgtgggtggcttcgtggccgaagctggttctgtttctctccacagtactggtg
gtaggactggccagtggcctggtcttcctgaagctgaccacagatcccgtagagctgtgg
tcaaatcccaacagccaggccaggagggagaaggaattccacgaccgctattttgggcct
ttcttccgcaccaaccaggtgatcttgacagctcctagccagcctggctatacctatgat
tccctgcttctgggacccaagaacttcagtggcattttgagggaggagctgctccttcaa
ctgctggagttgcaagaggagctgaggcatctggaggtctggtctgaggaagagcaacgc
aacatctccctcagggacatctgctacgcccctctccagccccacaaccccaggctggag
gactgctgcatcaacagcttcctgcagtacttccaaagcaatcgcaccaacttcctcctg
actgccaatcagaccctgatggggaagacggccgagatcaactggagggaccactttctc
tactgtgtcaattcccccctcacattcaaggatggcacatccttggctctgagctgcatg
gccgattatggggctcctgtctttcccttccttgctgtgggagggtactcaggacaggat
ttttctgatgctgaagctctcatcctgactttttccttgaacaactacccggctggggat
ccccgcctggcccaaactcggctgtgggagagccactttctgaaggtgatgaaagacttc
aagatccgtacagccggcacctttgaagtcactttcatggcagagcgttctctggaagac
gagataaaccgtaccacagccgaggacctgcccatctttgccatcagctatgccattgtc
ttcctgtacattactctggccttggggagatacactagctgctcccgtgtactggtggat
tccaaggtgactctgggcttaggcggagtactggtggtgctgggatctgtgctcgcctca
atgggcttcttctcctacgtgggtatcccctcttctatggtgatcatccaggtcgttccc
ttcctcgtgcttgctgtcggagctgacaacatctttatctttgttctcgagtatcagagg
ttgccacgtctcccaggggaacaacgggagatgcatattggacgagtcttgggcagtgta
gctcccagcatgctcctttgcagtctgtctgaggccatctgttttttcttaggtgccctg
acccagatgccagctgtgcgcacttttgctttgacagctggcttggccattatccttgat
ttcttgctgcagatgtcagcttttgttgccttgctttctctggacagcaagaggcaagag
gcatcccacatggatatctgctgctgtgtgggcaccaatgaagtgcctccctctggtgat
ggtgagggtctcctacttcgcttcttccgcaagttttatgcccccttcctgctgcatgga
ttcacccgtgtcattgtgcttgtactattcatggccctgtttggtgtgagcctttatttc
atgtgccagatcaatgtggggttggaccaggagctcgcactgcctgaggattcatacctt
ctgaattatttcctgttcctgaaccggtacttggaaattggagtacctgtttactttgtg
accacttctggctataacttttcgagcacggacggcacgaatgctatctgttccagttct
ggctgcaatcctttctccctcactcagaagatccaatatgccaccaagttccccaaagag
tcctatctggctatcccagcttcctcgtgggtggatgacttcattgactggctatcaccc
ttgtctgattgctgccgtctttataataataatggaaccttttgtccttctactactact
acagctttctttacctgcttaaggaagtgcataagcaagaccaggcccacagaggctcag
ttccacaagtacctgccttggtttttggaggacagagccaatatcaactgccccaaaggg
ggcctgggagcttatgacagttctgtgaacattagtgcagatggcaagatcctagctaca
cggtttatggcttaccatacacccctcaagaattctcaagattatacagaagcccttcgg
gccgcccgggaattggcagtcaatatcacagctgacctgcggactgttccagggactgat
cctaattttgaggtcttcccctacacaatcacctatgtattctatgaacagtatctaacc
atcgttccagagggactattcattctgagtctctgtatcatacctacatttgttgtctgc
tgcctcctgcttgggatggacctccgctccggcttcctcaatctgttctccatcatcatg
atccttgtggatactgtaggcttcatgaccttgtggggcatcagctacaatgctgtggcc
ctcatcaatttggttacggctgtgggtatctcagtggagtttgtttcccacatcacccgc
tcctttgctgtcagtaccaagcccactcggctggagagggccaaagaggccacggtcatt
atgggcagtgcggtctttgctggagtggccatgaccaatcttcccggcatcatcattctg
gcctttgctaaggcccaattgatccagatctttttctttcgcctcaacctcctcatcacc
atcttcggcatgctgcatggtctcatctttctgcctgtgatcctcagctattttgggcca
gatgtcaaaccaatcctggtcctggcacagcagcaaacagaagagaataccatggcaaac
aaggagaacaagtcagaagctgccacggcagcttcttgctcaaagtctcctccttcattc
tcttctaacttgaactcctatattaactctaattttaagaatgatgtgaccgaatttcct
agtggtaccaaagaacttgagccgacaacacctctttga
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