Sarcophilus harrisii (Tasmanian devil): 100922331 Help Entry 100922331         CDS       T02286                                  Symbol TRAF6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism shr  Sarcophilus harrisii (Tasmanian devil) Pathway shr04010   MAPK signaling pathway shr04064   NF-kappa B signaling pathway shr04120   Ubiquitin mediated proteolysis shr04140   Autophagy - animal shr04144   Endocytosis shr04380   Osteoclast differentiation shr04620   Toll-like receptor signaling pathway shr04621   NOD-like receptor signaling pathway shr04622   RIG-I-like receptor signaling pathway shr04657   IL-17 signaling pathway shr04722   Neurotrophin signaling pathway shr04936   Alcoholic liver disease shr05132   Salmonella infection shr05133   Pertussis shr05135   Yersinia infection shr05140   Leishmaniasis shr05142   Chagas disease shr05145   Toxoplasmosis shr05152   Tuberculosis shr05160   Hepatitis C shr05161   Hepatitis B shr05162   Measles shr05168   Herpes simplex virus 1 infection shr05169   Epstein-Barr virus infection shr05170   Human immunodeficiency virus 1 infection shr05171   Coronavirus disease - COVID-19 shr05200   Pathways in cancer shr05222   Small cell lung cancer shr05235   PD-L1 expression and PD-1 checkpoint pathway in cancer shr05417   Lipid and atherosclerosis Brite KEGG Orthology (KO) [BR:shr00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     100922331 (TRAF6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     100922331 (TRAF6)    04064 NF-kappa B signaling pathway     100922331 (TRAF6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     100922331 (TRAF6)    04140 Autophagy - animal     100922331 (TRAF6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     100922331 (TRAF6)    04621 NOD-like receptor signaling pathway     100922331 (TRAF6)    04622 RIG-I-like receptor signaling pathway     100922331 (TRAF6)    04657 IL-17 signaling pathway     100922331 (TRAF6)   09156 Nervous system    04722 Neurotrophin signaling pathway     100922331 (TRAF6)   09158 Development and regeneration    04380 Osteoclast differentiation     100922331 (TRAF6)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     100922331 (TRAF6)    05235 PD-L1 expression and PD-1 checkpoint pathway in cancer     100922331 (TRAF6)   09162 Cancer: specific types    05222 Small cell lung cancer     100922331 (TRAF6)   09172 Infectious disease: viral    05170 Human immunodeficiency virus 1 infection     100922331 (TRAF6)    05161 Hepatitis B     100922331 (TRAF6)    05160 Hepatitis C     100922331 (TRAF6)    05171 Coronavirus disease - COVID-19     100922331 (TRAF6)    05162 Measles     100922331 (TRAF6)    05168 Herpes simplex virus 1 infection     100922331 (TRAF6)    05169 Epstein-Barr virus infection     100922331 (TRAF6)   09171 Infectious disease: bacterial    05132 Salmonella infection     100922331 (TRAF6)    05135 Yersinia infection     100922331 (TRAF6)    05133 Pertussis     100922331 (TRAF6)    05152 Tuberculosis     100922331 (TRAF6)   09174 Infectious disease: parasitic    05145 Toxoplasmosis     100922331 (TRAF6)    05140 Leishmaniasis     100922331 (TRAF6)    05142 Chagas disease     100922331 (TRAF6)   09166 Cardiovascular disease    05417 Lipid and atherosclerosis     100922331 (TRAF6)   09167 Endocrine and metabolic disease    04936 Alcoholic liver disease     100922331 (TRAF6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:shr04131]     100922331 (TRAF6)    04121 Ubiquitin system [BR:shr04121]     100922331 (TRAF6) Enzymes [BR:shr01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      100922331 (TRAF6) Membrane trafficking [BR:shr04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     100922331 (TRAF6) Ubiquitin system [BR:shr04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     100922331 (TRAF6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF TRAF6_Z2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 zf-TRAF_2 zf-RING_5 SlyX TRAF3_RING RING_XB3-XBAT31 zf-RING_11 U-box DUF4455 PspA_IM30 CENP-F_leu_zip Spc29 DUF16 DUF1664 zf-U1 Med21 ATG16 Tropomyosin DUF7310 NPV_P10 DASH_Spc34 TMF_DNA_bd Nuf2_DHR10-like CEP104_ZnF UPF0242 Motif Other DBs NCBI-GeneID:  100922331 NCBI-ProteinID:  XP_012408031 Ensembl:  ENSSHAG00000013890 UniProt:  A0A7N4PPL3 LinkDB All DBs Position 6:complement(222446352..222466445) Genome browser AA seq 530 aa AA seqDB search MSLLNCEDSCGGNQPESDCCPAMASACSTGAKEDSINGSPVPGNLSSSLMEEIQGYDVEF DPPLESKYECPICLMALREAVQTPCGHRFCKACIVKSIRDAGHKCPVDNEILLENQLFPD NFAKREILSLTVKCPNEGCLLKMELRHLEDHQTHCEFALVECSQCHLSFRKYLLHNHMLT ECPRRQVSCVNCAAPMPFEEKEFHDQNCPLATVFCKYCNTMLIREQMPNHYDIDCPTAPI PCTFSTFGCDKKMQRNHLARHLQEDTLAHMRMMAQAIQNISIAAFDPGVPRIPSGCHQEV QNFQETIQQLESRLVMQDHQIRELTAKMETQSACVGDLKRTIRTLEDKITEMEAQQCNGI YIWKINNFGMHLKSQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPSAQRCANYISLFVH TMQGEYDSHLPWPFQGTIRLTILDQSEAPVRQNHEEVMDAKPDLLAFQRPTIPRNPKGFG YVTFMHLQALRQRTFIKDDTLLVRCEVLTRLDMNSLRREGFQPRSTDAGV NT seq 1593 nt NT seq  +upstreamnt  +downstreamnt atgagtctgctaaactgtgaagacagctgcggtggcaaccagccggaaagtgactgttgc cccgccatggccagtgcctgcagcaccggtgccaaggaggacagcataaacgggagcccc gttcctgggaacctttccagctccctgatggaagagattcaaggctatgatgtggagttt gatccaccccttgaaagcaaatacgagtgtcccatctgtctgatggcgttacgggaagct gtgcaaaccccatgtggccatcgcttctgcaaggcctgtattgtcaagtcaataagagac gcgggtcacaaatgccctgtagataatgaaatactgctggaaaatcaactatttcctgac aattttgctaaacgggaaatcctctcacttacagtgaaatgtccaaatgaaggttgtctg ctgaaaatggaactgaggcatctagaggatcaccagacacattgtgagtttgcacttgtg gaatgctcacagtgccacctttcctttcggaaatatctccttcacaatcatatgctcacg gagtgtccaaggcggcaagtgtcatgtgtgaattgtgctgccccaatgccatttgaagag aaagagttccatgaccagaactgtccactggcaacagtcttctgtaaatactgcaacacc atgctcatccgcgaacagatgcctaatcactatgatatagattgcccaacagctccaatt ccatgtacattcagtacatttgggtgtgataagaagatgcagaggaatcatttggcacgc cacctgcaagaggatactctggcccacatgcgcatgatggcacaggccatccagaacatc agcattgcagcttttgatccgggggtgccccggatcccctcaggatgccaccaggaggtt cagaacttccaagaaaccatccagcagttggagagtcgccttgtgatgcaagaccatcaa atccgagagctgacggccaagatggaaacgcagagtgcttgcgtaggggacctcaaacgg accattcgaaccctcgaggacaagatcaccgagatggaggcgcagcagtgcaatggcatt tacatctggaaaatcaacaactttgggatgcatttgaaatcccaagaagaggagaaaccc gtagtcatccacagccctggattctacactgggaaacccggctataagctctgcatgcgc cttcacctgcagctgcccagtgctcagcgctgcgctaactacatttccctttttgtccac acgatgcaaggtgagtatgacagccatcttccctggcccttccagggcacgatacgcctt actattcttgatcagtctgaagccccggtgaggcagaatcatgaagaggtaatggacgcc aagccagatctgctggccttccagagacccaccatcccccggaaccccaaaggttttggc tacgtaactttcatgcatttacaagcccttagacaaagaaccttcattaaagatgatact ttacttgtgcgttgtgaggttttgacacgcctggacatgaatagcttacggagggaggga tttcagccacgcagtactgacgcaggggtgtag

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