Sarcophilus harrisii (Tasmanian devil): 100923003
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Entry
100923003 CDS
T02286
Name
(RefSeq) HLA class II histocompatibility antigen, DR alpha chain
KO
K06752
MHC class II antigen
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04145
Phagosome
shr04514
Cell adhesion molecules
shr04612
Antigen processing and presentation
shr04640
Hematopoietic cell lineage
shr04658
Th1 and Th2 cell differentiation
shr04659
Th17 cell differentiation
shr04672
Intestinal immune network for IgA production
shr04940
Type I diabetes mellitus
shr05140
Leishmaniasis
shr05145
Toxoplasmosis
shr05150
Staphylococcus aureus infection
shr05152
Tuberculosis
shr05164
Influenza A
shr05166
Human T-cell leukemia virus 1 infection
shr05168
Herpes simplex virus 1 infection
shr05169
Epstein-Barr virus infection
shr05310
Asthma
shr05320
Autoimmune thyroid disease
shr05321
Inflammatory bowel disease
shr05322
Systemic lupus erythematosus
shr05323
Rheumatoid arthritis
shr05330
Allograft rejection
shr05332
Graft-versus-host disease
shr05416
Viral myocarditis
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100923003
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100923003
09150 Organismal Systems
09151 Immune system
04640 Hematopoietic cell lineage
100923003
04612 Antigen processing and presentation
100923003
04658 Th1 and Th2 cell differentiation
100923003
04659 Th17 cell differentiation
100923003
04672 Intestinal immune network for IgA production
100923003
09160 Human Diseases
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
100923003
05164 Influenza A
100923003
05168 Herpes simplex virus 1 infection
100923003
05169 Epstein-Barr virus infection
100923003
09171 Infectious disease: bacterial
05150 Staphylococcus aureus infection
100923003
05152 Tuberculosis
100923003
09174 Infectious disease: parasitic
05145 Toxoplasmosis
100923003
05140 Leishmaniasis
100923003
09163 Immune disease
05310 Asthma
100923003
05322 Systemic lupus erythematosus
100923003
05323 Rheumatoid arthritis
100923003
05320 Autoimmune thyroid disease
100923003
05321 Inflammatory bowel disease
100923003
05330 Allograft rejection
100923003
05332 Graft-versus-host disease
100923003
09166 Cardiovascular disease
05416 Viral myocarditis
100923003
09167 Endocrine and metabolic disease
04940 Type I diabetes mellitus
100923003
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shr04147
]
100923003
Exosome [BR:
shr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100923003
Exosomal proteins of epithelial cells
100923003
Exosomal proteins of breast milk
100923003
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_II_alpha
C1-set
Ig_3
Ig_2
Motif
Other DBs
NCBI-GeneID:
100923003
NCBI-ProteinID:
XP_003770700
Ensembl:
ENSSHAG00000003189
UniProt:
G3VKC5
LinkDB
All DBs
Position
4:complement(284685989..284692040)
Genome browser
AA seq
256 aa
AA seq
DB search
MMPNKALILGTFTLAMLLNPWGARAIKENHVIIQAEFYQTHNPLGEFMFDFDGDEIFHVD
LDKRETVWRLPDFSKFASFEAQGALANLAVDKANLEIMIKRSNNTPDTNVPPEVTVFPKS
PAEMDQPNVLICFIDKFSPPVLNVTWLRNGQPITDGVFETVFLPRPDHAFRKFHYLTFIP
SANDYYDCKVDHWGLEQPLMKHWEPEIRTPLPETTETVVCALGLAIGLVGIVVGTILIIK
GMKSSNASRGGPRGPL
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgatgcccaacaaagctttgatcctagggactttcaccctggccatgctgctgaatccc
tggggagccagagccattaaagagaatcatgtgatcatccaagctgagttctaccagacc
cacaaccctttaggagagttcatgtttgattttgatggggatgaaattttccatgtggat
ttggacaagagagagacagtctggcgtcttcctgacttcagcaaatttgccagctttgag
gctcagggtgctctggccaatcttgctgtggacaaagccaatctggaaatcatgataaaa
cggtccaacaacactcctgatactaatgtgccccctgaagtgacagtgtttcctaagagc
ccagcggagatggaccagcccaatgtccttatctgcttcattgacaagttctctcctccc
gtacttaatgtgacatggcttcgtaatgggcagcccatcactgatggtgtgtttgagact
gtcttcctcccccgccctgatcatgccttcagaaaattccactacctcaccttcatcccc
tctgccaatgattactatgactgtaaggtcgatcactggggactggaacaacctcttatg
aaacattgggaaccagaaatacgaaccccactgccagagacaacagagactgtggtctgt
gccctgggcctagccattggcctagtgggcatcgttgtgggcaccatcttgattatcaag
ggcatgaaatcaagcaacgcttcccgtggtggccctcgtggacccctgtga
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