Sarcophilus harrisii (Tasmanian devil): 100923234
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Entry
100923234 CDS
T02286
Symbol
RNF123
Name
(RefSeq) E3 ubiquitin-protein ligase RNF123
KO
K12169
Kip1 ubiquitination-promoting complex protein 1 [EC:
2.3.2.27
]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shr04121
]
100923234 (RNF123)
Enzymes [BR:
shr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100923234 (RNF123)
Ubiquitin system [BR:
shr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100923234 (RNF123)
Multi subunit type E3
KPC complex
100923234 (RNF123)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_RNF123
SPRY
zf-C3HC4_3
zf-RING_2
zf-C3HC4
zf-C3HC4_2
SidE_PDE
zf-C3HC4_4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
100923234
NCBI-ProteinID:
XP_003762299
Ensembl:
ENSSHAG00000017590
LinkDB
All DBs
Position
1:complement(84380892..84495167)
Genome browser
AA seq
1307 aa
AA seq
DB search
MTSKGAGTSFSQKSYRLTSDSEKPKVTGIVNEKLLDDYLQRIFPSPDQIPSTTASRKPLS
FQNLQEHLDQLLKEDDEAEESEEQTVEGRLGPSTVVLDHTSGFEGLLLVDDDLLGVIGHS
NFGSIRATTCVYKGKWIYEVLISSQGLMQIGWCTLNCRFNQEEGVGDTPDSYAYDGNRVR
KWNVTTTNYGKSWAAGDIVSCLIDLDEGTIAFCLNGVSLGTAFDNITRGSGMAYFPAISL
SFKESVAFNFGSRPLRYPIEGYRPLQDAPTTGLVKAQKLLGYLKNVLQLELDPEEGKLVE
RESSTWQLRGEPTVLITMAHIFNYFAPLMCKVYLVEDVLMKFLLGILETDGSEESYPLIQ
QLLDLMWLLMEDYEVQECLKQLMMSLLRAYRFSPIIPDLSLQMHYLRLTIAILKHEKSRK
FLLNNVLFDVLRSVVFFYIKSPLRVEEAGLQELIPTTWWPNRFNKEGKETKEVKEESAEE
RLRRRAYERGCQRLKKRIEVVEDLQVQILKLLLNNQDHNGGEASRYIFLNKFRKFLQENA
SSRGNLTVLCPPEYMVCFLHRLITALRYYWDEYKASNPAAAFSEEAYVPPQLFYNGKVDY
FDLQRLGGLLSHLKKTLKDDLASKANILIDPSELQAITMDDLDEDDESATSTAQRPVAAL
AIGGALARPSWLSSPTLSRANRFLSTAAVSLMNPRRPLGTMEKVKIRTLNVEQRTEEDIE
GSNGNEGLLLGRPPEEPDQPLTENSLLEILDGVIMMYNLSVHQQLGKMVGVSDDVNEYAL
ALKDTEEKLNRCPKWRKDIQEELMKSQKVFSEKLNHLSRRLAWINVTIYSKEKMQDIYWL
LRVCTRTIEHGDRTGSLFAFMPEFYLSVAMNSYSALKNYFSPVNSMEELPGYEETLTRLA
AILAKHFADTRIVGTDIRDSLMQALASYVCYPHSLRAVERIPEEQRITMMKNLLAPYEQR
PWAQTNWILVRLWRGCGFGYRYTRLPHLLKTKPEDANLPSLQKPCPSILLQGHMADLLRS
DRDMAPSFLNSVLNQLNWAFSEFIGMIQEIQQAAERLERNFVDSRQLKVCATCFDLSVSL
LRVLEMTVTLAPEIFLDWNRPSSELLLRRLAQLLNQVLNRVTAERNLFDRVVNLRLPGLE
SVDHYPILVAVTGILVRLLVDSDVEGAKRATEVLLADPCFQLRSIQYLLGQPEPSASGAT
PPPPERKHFSLQSYTDYISREELAKVDQMLGHLSEESKQAAASTLPTSEEDLCPICYAHP
ISAVFRPCGHKSCKACINQHLMNNKDCFFCKATITGVDDYEKPASSS
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcaaagggggcaggcacatctttctcccaaaagagttatagactgacttctgat
tctgagaagcccaaagtcacaggtattgtcaatgaaaagttactggatgactacctacag
cgtatctttcccagcccagaccagatcccttctaccactgctagcagaaaacctctgtcc
tttcagaatcttcaggagcatctggaccagctgctgaaggaggatgatgaggctgaagag
agtgaagaacagactgtagaagggcggcttgggccatccactgtggtcctggatcacacg
agtggctttgaggggctactcctggtggatgacgaccttcttggtgttattggacacagt
aacttcggctccatccgagccaccacctgtgtatataaagggaaatggatctatgaggtg
ctcatctcctcccaggggctcatgcaaatcggctggtgcaccctcaattgtcgatttaac
caggaggagggagttggagacacacctgactcttatgcttacgatggtaacagagtgcgt
aagtggaatgtgaccacaactaattatggcaaatcatgggcagctggagacattgtgagt
tgtctgattgatctggatgaaggaaccattgccttttgtctgaatggtgtctctctggga
actgcttttgacaacatcaccaggggctctggaatggcttatttcccagctatcagcctc
tctttcaaagagtctgttgcattcaattttggcagccggccactgcgatatccgatagag
ggttatcgacccctccaagatgcccctactactggcctcgttaaggctcaaaagcttctt
ggttacctgaagaatgtcctgcaattggagttggacccagaggaagggaagctggtggag
agggaaagttcgacatggcagcttcggggagaacccacagtattgatcaccatggcacac
atcttcaactactttgctccactcatgtgcaaagtatacttagtggaagatgtcctcatg
aaatttctcctgggcatcctggagacagatgggtcagaggaatcttatccccttatccag
cagctcctggatctaatgtggctcctcatggaggattatgaagtacaggaatgcctcaag
caactgatgatgtccctcctccgagcttacaggttctcccccatcatcccagacctgagc
ttacagatgcattaccttcgtcttaccatcgctatcttgaagcatgagaagtccaggaaa
tttctgcttaacaatgtcctcttcgatgtgctccgctctgtggttttcttctacatcaag
agtcccttaagagttgaggaggccggtcttcaggagctcatccccaccacgtggtggccc
aatcgcttcaataaagagggcaaagaaactaaggaggtgaaggaagagagtgctgaggaa
cggctgagacggcgggcgtatgagagaggttgccaaagactcaagaaacgaattgaagtg
gtagaagatctccaggttcagatcctgaaattactgttaaataatcaagaccataatggg
ggtgaagcttccagatacattttcctcaacaagtttcgaaagttcctgcaagagaatgcc
agcagccgagggaacctgactgtcctctgcccaccagagtacatggtatgctttctgcat
cggctgatcacggccttgaggtactactgggacgaatacaaggcttcaaacccagcagca
gcattcagtgaagaagcctacgttcccccacaactcttctataatgggaaggtggattat
tttgacctacagcgactgggaggcctcctgtctcatcttaagaaaaccctcaaagatgac
ctggcatcgaaggcaaatatcttgattgacccctcagagctacaagccatcactatggat
gaccttgatgaagatgatgagtcagctacatcaactgcacagcgccctgtggctgctcta
gctattggaggggccctggccaggcccagttggctcagctctccaacactgagtcgggcc
aaccgcttcctcagcacagcagccgtgagcctcatgaaccctcggaggccgctgggcacc
atggaaaaagtgaaaatccgaacgctgaatgtggaacagagaacagaggaggatattgaa
gggagcaatggaaatgaaggcctgttgttggggaggcccccagaggagccagaccaaccc
cttacggagaactccctactagagatcctggatggggtcatcatgatgtacaacctgagt
gttcaccagcagttgggcaagatggtgggtgtttctgatgacgtgaatgagtatgccttg
gccttgaaagacacagaggagaaactcaatcggtgtccaaagtggaggaaagacattcaa
gaagaattgatgaaaagtcagaaggttttctctgagaagctgaatcatttgagtcgtcgt
cttgcctggatcaatgtcaccatctactctaaggagaaaatgcaggatatttactggctc
ctccgggtttgtacccgcaccatagaacatggcgaccgcacaggctccctgtttgccttt
atgcctgagttctatctaagtgtcgccatgaacagctacagcgccctcaaaaattacttc
agccctgtcaatagcatggaggagctgccaggttacgaggaaacactgacccgccttgct
gccattctagccaaacactttgcagacacaagaattgtgggcacagacatccgagattca
ctgatgcaagcgctggccagctatgtctgttacccccactcacttcgtgctgtggaacgg
atacctgaggaacaacggatcacaatgatgaagaacctcctcgctccttatgagcagcgt
ccctgggcccagacaaattggatcctcgtgcgcttgtggcggggctgtgggtttgggtat
cgctacacgcggctgcctcatctgctgaaaacaaagcccgaggatgccaaccttcccagc
ctgcagaagccctgcccctctatcttactgcagggccacatggctgacctgctgcgcagt
gaccgggacatggctcccagcttcctcaacagtgtcctcaaccagctcaactgggccttc
tctgagttcattggcatgatccaggagattcagcaagcagccgagcgcctggaaaggaac
tttgtggacagtcgtcagctgaaggtgtgcgccacctgctttgacctgtcagtgagcctg
ctccgggtgctggagatgaccgtcaccctggcccccgagatttttctggactggaatcgg
ccctcctctgaactgctgctccggcggctggcgcagctactgaaccaagtcctgaaccgc
gtgaccgctgagaggaacttgtttgatcgagtggttaatctccggctgccaggcttggag
agtgtagaccactatccaattcttgtcgctgtgactggcattctagtccgtctcctggtg
gacagtgatgtggagggggccaagcgagccaccgaagtgctcttagcggacccgtgcttc
cagctccgctccatccagtacctcctgggccagccagagccctcggcctctggggctact
cccccccctccagagaggaaacacttctccctgcagagttacactgattacatcagccgg
gaggaattagctaaagtggatcagatgctgggccacctgagtgaggagtccaagcaggca
gctgcctccactttgcccaccagtgaggaggacctgtgccccatctgctacgcccacccc
atctctgctgtgttccggccctgcggccacaagtcctgcaaagcctgcatcaaccagcac
ctgatgaacaacaaagactgtttcttctgcaaagctacaatcactggggtggatgactac
gagaagccagcttcctcatcctag
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integrated database retrieval system
