Sarcophilus harrisii (Tasmanian devil): 100923750
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Entry
100923750 CDS
T02286
Symbol
LDLR
Name
(RefSeq) low-density lipoprotein receptor isoform X1
KO
K12473
low-density lipoprotein receptor
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03272
Virion - Hepatitis viruses
shr04144
Endocytosis
shr04913
Ovarian steroidogenesis
shr04925
Aldosterone synthesis and secretion
shr04927
Cortisol synthesis and secretion
shr04934
Cushing syndrome
shr04976
Bile secretion
shr04979
Cholesterol metabolism
shr05145
Toxoplasmosis
shr05160
Hepatitis C
shr05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
100923750 (LDLR)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100923750 (LDLR)
09150 Organismal Systems
09152 Endocrine system
04913 Ovarian steroidogenesis
100923750 (LDLR)
04925 Aldosterone synthesis and secretion
100923750 (LDLR)
04927 Cortisol synthesis and secretion
100923750 (LDLR)
09154 Digestive system
04976 Bile secretion
100923750 (LDLR)
04979 Cholesterol metabolism
100923750 (LDLR)
09160 Human Diseases
09172 Infectious disease: viral
05160 Hepatitis C
100923750 (LDLR)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
100923750 (LDLR)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
100923750 (LDLR)
09167 Endocrine and metabolic disease
04934 Cushing syndrome
100923750 (LDLR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shr04131
]
100923750 (LDLR)
Membrane trafficking [BR:
shr04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
100923750 (LDLR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
cEGF
FXa_inhibition
EGF_CA
SGL
Vgb_lyase
EGF
hEGF
Psg1
EGF_3
Motif
Other DBs
NCBI-GeneID:
100923750
NCBI-ProteinID:
XP_031803417
Ensembl:
ENSSHAG00000009412
UniProt:
G3W664
LinkDB
All DBs
Position
1:648059684..648094018
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AA seq
860 aa
AA seq
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MKAPRALDVLLSSGLFVILILPTATNAVDKCGRNEFQCLDGKCISYKWVCDGTAECKDGS
DETLETCSSVTCKQGEFSCGGRINRCIPSTWKCDSHNDCENGSDEQDCPPKTCAHDQFRC
HDGKCISQEFVCDTDRDCEDGSDELNCPDPTCNPATFQCNNTVCIPKLWACDGDQDCEDG
SDEWPDNCGGHSLVKESKPCSSLEFHCGSGECIHMSWKCDGGFDCKDKSDEEGCVKATCR
PDEFQCNDGECVHGSRQCNKEYDCKDMSDEMGCVNVTLCEGPDKFKCHSGECISFDKVCN
GPRDCRDWSDEPIKECGTNECLDNKGGCSHICNDLKIGYECLCPEGFRLVDQKRCEDIDE
CQNPDICSQSCVNLQGSYKCECNEGYQTDPITKTCKAIGTIAYLFFTNRHEVRKMTLDRS
EYISLIPNLKNVVALDMEVASNKIYWSDLSQKKIYSSEIDSAHSFSTHDTVISGDIQAPD
GIAVDWIHGNLYWTDSVLGTISVANTKGSKRKTLFKQEGAKPRAIVVDPVHGFMYWTDWG
TPAKIEKSGLNGVDSFPLVTENIQWPNGITLDLSSERLYWVDSKLHSISSVDVNGGNRRI
VLEDKNKLAHPFSLAIFEDKVFWTDIMNEAIFSANRLTGSDIILVAEDLLSPEDIVLYHN
LTQPTGVNWCERTSLPNGGCQYLCLPAPQINSHSPKFTCACPDGMSLAADMRKCTKEVTV
PATSTTAKAPHSKLTTLARLVTPVTTRKPTTKNGTPDLTTAEMVTMSQKAVQNPMGMQDT
PEHQGGSKALYIVLPLVLISLICFGAYVVWKKWRLRNINSINFDNPVYQKTTEDEVHICR
SQDGYTYPSRQMVSLEDDIA
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccccacgagctttagatgtattgttgagttcagggctctttgttattctgatt
ctacctacagctacgaatgcagtggacaaatgtgggaggaatgaattccagtgcctggat
ggaaagtgcatctcctataagtgggtctgcgatggtactgccgagtgtaaggacggatcg
gacgaaaccctggagacctgctcatctgtgacctgcaaacaaggagagttcagttgcggt
ggccgcattaatcgctgcattccctccacctggaaatgtgactcccataatgactgtgaa
aatggttcagatgaacaagattgcccccctaagacttgtgcccacgaccagttccgatgc
catgatggaaagtgcatctcccaagaatttgtctgcgacacggaccgggactgtgaggat
gggagcgatgagctgaattgtccagaccccacctgcaatccggccacgttccagtgcaac
aacactgtctgtatccccaagctatgggcctgtgatggtgaccaggactgtgaggatggc
tccgatgaatggcctgacaactgtgggggacacagcttggtcaaggagtccaagccttgc
tcctctctggagttccactgtggcagtggagagtgtatccacatgagctggaagtgtgat
ggcggttttgactgcaaggacaagtctgatgaagaaggatgtgtcaaagccacttgccgc
ccagatgagttccagtgcaatgatggggagtgtgtccacgggagccgacagtgcaacaag
gaatatgactgcaaggacatgagtgatgagatgggctgtgtcaacgtaacactgtgtgag
ggcccagacaaatttaaatgtcacagtggagagtgtatctcttttgacaaagtgtgtaat
ggacccagagactgccgggactggtctgacgagcccatcaaggagtgtggaaccaatgag
tgtctggacaacaaaggtggatgctcacatatatgtaatgacctcaagataggctatgaa
tgcctgtgccccgaaggcttccggctggttgaccagaaaagatgtgaagatattgatgaa
tgtcagaacccagacatctgcagccaatcctgtgtgaatctccagggaagttacaagtgt
gaatgcaatgaaggctaccaaaccgatccgatcacaaagacctgcaaggccattggcact
attgcctatctctttttcaccaaccgccacgaagtgaggaagatgactctggaccgaagt
gaatacattagcctcattccaaacctgaagaatgtcgtagccttggacatggaggttgcc
agcaataagatctactggtctgacctctcacagaagaagatctatagctctgaaattgac
agtgcccacagtttttccactcatgacaccgtgatcagtggggatatccaggctccagat
ggcattgcagttgactggatccatgggaatctctactggacagactctgtccttggtacc
atttctgtagccaatactaagggctccaagaggaagacacttttcaagcaggaaggcgca
aaaccgcgggccattgtggtagacccagttcatggcttcatgtattggacagactgggga
acccctgccaaaattgagaaaagtggtctgaatggagttgacagcttccccctggtgaca
gaaaacatacagtggcccaacggaattactcttgatctttccagtgaacggctctattgg
gttgactccaaactccactccatctccagcgtggatgtcaatggtggaaataggaggatt
gtattagaggataaaaacaaacttgcacacccattctccttggcaatctttgaggataaa
gtgttctggacagatattatgaatgaagccattttcagtgctaatcgcctcacgggatcc
gatatcattttggtggcggaagatctgttgtctcctgaggacattgttctctatcacaac
ctcacccagcctacaggagtgaactggtgtgagaggacttctctccccaatgggggctgc
cagtatctgtgccttccagctccccagatcaactctcactcccccaaattcacctgtgcc
tgtcctgacggcatgtccctggctgcagacatgagaaagtgtaccaaagaagtgactgta
cctgctacttctaccacagcaaaggcgcctcattctaaattgaccactcttgcccggtta
gtaacacctgtaacaactcggaagccgaccaccaaaaacggcactcctgatctcacaaca
gcagaaatggttacaatgtcccaaaaagcagttcaaaatccaatgggcatgcaagacact
ccagaacatcaaggtggatccaaagctctatacattgttttaccattagttctgatctct
ttgatttgctttggtgcatacgtggtttggaagaaatggcgactcaggaacatcaatagt
ataaattttgataatcctgtctatcaaaagaccacagaggatgaagttcacatctgtaga
agtcaagatggctacacgtacccctcgagacagatggtgagcctggaagacgatattgca
tga
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