Sarcophilus harrisii (Tasmanian devil): 100925042
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Entry
100925042 CDS
T02286
Symbol
KDM2A
Name
(RefSeq) lysine-specific demethylase 2A isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
100925042 (KDM2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shr03000
]
100925042 (KDM2A)
04121 Ubiquitin system [BR:
shr04121
]
100925042 (KDM2A)
03036 Chromosome and associated proteins [BR:
shr03036
]
100925042 (KDM2A)
Enzymes [BR:
shr01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
100925042 (KDM2A)
Transcription factors [BR:
shr03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
100925042 (KDM2A)
Ubiquitin system [BR:
shr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
100925042 (KDM2A)
Chromosome and associated proteins [BR:
shr03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
100925042 (KDM2A)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
100925042 (KDM2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
DUF7885
JmjC
Cupin_8
Cupin_1
Motif
Other DBs
NCBI-GeneID:
100925042
NCBI-ProteinID:
XP_031799747
Ensembl:
ENSSHAG00000000130
UniProt:
A0A7N4P7E4
LinkDB
All DBs
Position
6:complement(240486250..240585077)
Genome browser
AA seq
1162 aa
AA seq
DB search
MEPEEERIRYSQRLRGTMRRRYEDDGISDDEIEGKRTFDLDEKLHTNKYNASFVTFMEGK
DFNVEYIQRGGLRDPLIFKNSDGLGIKMPDPDFTVNDVKMCVGSRRLVDVMDVNTQKGIE
MTMAQWTRYYETPEEEREKLYNVISLEFSHTRLENMVQRPTTVDFIDWVDNMWPRHLKES
QTESTNAILEMQYPKVQKYCLMSVRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAQN
LELYENWLLSGKQGDIFLGDRVSECQRIELKQGYTFVIPSGWIHAVYTPTDTLVFGGNFL
HSFNIPMQLKIYNIEDRTRVPNKFRYPFYYEMCWYVLERYVYCITNRSHLTKDFQKESLS
MDLELNGLESGNVDEEASEKEPRRLSSRRSILTSPMANGVNVDYDGLGKTCRTLPGLKRP
SLSVDSSSESSRSSHNGQMWDPQCSPRKDKQVHLTHFELEGLRCLVEKLESLPLHKKCVP
TGIEDEDALIADVKILLEDLAHSDPKLALTGVPIVQWPKRDKLKFPTRPKVRVPTIPITK
PHTMKPAPRLTPVRPAASPIVSGARRRRVRCRKCKACVQGECGVCHYCRDMKKFGGPGRM
KQSCVLRQCLAPRLPHSVTCSLCGEVDQNEENQDFEKKLMECCICNEIVHPGCLQMDGEG
LLNDELPNCWECPKCYQEDTSEKVQKRKMEDSDEDVVQAKVLRPLRSCDEPLTPPPHSPT
AMLQLIHDPVSPRGVVTRSSPGAGPSDHHSASRDERFKRRQLLRLQATERTMMREKENNP
SGKKELSEVEKAKIRGSYLTVTLQRPTKELHGTSIVPKLQAITASSTNLRHSPRVLVQHC
PARAPQRGEEEGLAAEEEEDEEDEDEEDSAEEGGAARLNGRGGWAQDGEESWMQREVWMS
VFRYLSRRELCECMRVCKTWYKWCCDKRLWTKIDLSRCKAIVPQALSGIIKRQPVSLDLS
WTNISKKQLTWLVNRLPGLKDLLLAGCSWSAVSALSTSSCPLLRTLDLRWAVGIKDPQIR
DLLTPPTDKPGQDNRSKLRNMTDFRLAGLDITDATLRLIIRHMPLLSRLDLSHCSHLTDQ
SSNLLTAVGSSTRNSLTEINMAGCNKLTDQSLLYLRRISNVTLIDLRGCKQITRKACEHF
ISDLSINSLYCLSDEKLIQKIS
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atggaacccgaggaagaaagaatccgttatagccagagactgcgtggcaccatgcgaaga
cgctatgaagatgatggtatttctgatgatgaaattgaaggaaaaaggacttttgacttg
gatgaaaaactccacaccaacaaatacaatgctagttttgtcacctttatggaaggaaaa
gattttaatgtagagtatatccagcggggtggcttgagagaccctctgattttcaagaat
tctgatggacttggaataaagatgcctgatccggacttcactgtgaatgatgtgaaaatg
tgtgtggggagccggagactggtggatgtcatggatgtgaacactcagaaaggcattgaa
atgaccatggcccagtggacccgctattatgagactccagaggaagagcgtgaaaaactc
tataatgttatcagcctggaattcagccacaccagactggagaacatggtgcagaggcct
accacggtggactttatcgattgggtggacaacatgtggccaagacacttgaaggaaagc
cagacagagtccaccaatgccattctggagatgcagtatcccaaagtgcagaagtactgt
ctcatgagtgtccggggctgctacacagactttcacgtggacttcggtggcacctctgtg
tggtaccacatacaccaggggggaaaggtcttctggctcatcccaccgacggcccaaaac
ctggaactgtacgagaactggctgctgtcgggaaaacagggagatatcttcctgggtgac
cgcgtgtcagaatgccaacgtattgagctcaagcaggggtacacctttgttatcccttca
ggctggattcatgcagtatacacccccacagacacattagtgttcgggggcaactttttg
cacagttttaacatccccatgcagctcaaaatctacaacattgaagatcggacgcgggtc
cccaataagttccgttatccattctactatgagatgtgttggtacgtgttagaacgatat
gtctactgcatcaccaaccgctcccacctgaccaaggatttccagaaagaatccctcagc
atggatttggaattaaatggtctggagtcaggaaacgtggatgaggaggcttccgagaag
gagccgaggcgcctgagcagccgacgctctatcctcaccagccccatggccaacggagtc
aacgtggattatgacgggctgggcaaaacctgcaggaccctgccagggctgaagagaccc
tctttgtcagtggactcatcttcagagtctagccggagctcccacaatggtcaaatgtgg
gatcctcagtgtagcccccggaaggacaagcaggttcacctgacacattttgagctggaa
ggtctccggtgccttgtggagaagctagagtcactgccattacacaagaaatgtgtccca
accgggatcgaagatgaagatgctctcattgctgatgtcaagatcctgctagaggacctt
gcccatagtgatcccaagttagccctcactggagtccccatagtacagtggcccaaaagg
gacaagcttaagttccccacgcggcccaaggtgcgggtccccaccatccccatcacgaag
cctcacaccatgaagcctgctccgcggctgaccccggtaagacccgctgcctcacccatt
gtctcaggagcccggcggcggcgggttcgatgtcggaaatgcaaggcctgtgtccagggg
gagtgtggtgtctgccactactgcagggacatgaagaagttcggggggcccgggcgcatg
aagcagtcgtgtgtccttcgccagtgtctggcgccccgactgcctcattcggtcacgtgc
tctctctgtggagaagtggatcagaatgaggagaaccaagactttgagaagaagcttatg
gaatgctgtatctgcaatgagatcgttcatcccggctgcctgcagatggacggagagggg
ctgctcaatgacgagctgccgaattgctgggagtgcccgaaatgctaccaagaggatacc
tcagagaaggtacagaaacgtaagatggaggacagcgacgaagacgtggtccaagccaaa
gtcctgcggcctctgcggagctgtgacgagcctctcacgccaccccctcactcacccact
gccatgctgcagctcatccatgaccccgtgtccccccgaggcgtggtgacccggtcctcc
ccaggggccggtcccagtgaccaccacagtgctagccgtgacgagcgcttcaaacggcgg
cagctgctgcggcttcaggccaccgagcgaacgatgatgcgcgagaaggagaacaatccc
agcggcaagaaagagctctccgaagtggagaaggccaaaatccgggggtcctacctcacg
gtcacgctgcagaggcccaccaaagagctgcacgggacatccattgtgcccaagctgcag
gccatcacggcctcctccaccaacctccgccactctccccgcgtgctggtgcagcattgt
ccggcccgcgcgccccagcggggagaggaggagggcctggccgcggaggaggaggaggac
gaggaggacgaggacgaggaggacagtgcggaggagggcggggccgcccggctgaatggc
cggggcggctgggcgcaagacggggaggagagctggatgcagcgggaggtctggatgtct
gtcttccgttacctcagccgcagagaactttgtgaatgtatgcgggtgtgcaagacctgg
tataaatggtgctgtgacaagagactctggacaaagattgatttgagcaggtgcaaggcc
atcgtcccccaggccctgagcggtatcatcaagaggcagccggtcagcctggacctcagt
tggaccaacatctccaaaaagcagctgacctggctcgtcaacaggcttcccggtctaaaa
gatctcctgctggcaggctgctcctggtccgcggtctctgccctcagcacctccagctgc
ccacttctcaggaccctggaccttcggtgggccgtgggaatcaaggaccctcagattcga
gacttgctgaccccgccgactgataagcctggtcaggacaatcgcagcaagctccgaaac
atgaccgatttccggctggctggcctggacatcaccgacgccaccctccgcctcatcatc
cgccacatgccgcttctgtctcggctcgacctcagtcactgcagccaccttacagaccag
tcgtccaacctgctgaccgccgtcggctcctccacgcgcaactccctcaccgaaatcaac
atggcaggttgcaataagctgacggaccagtccctgttgtatctccggcgcatctccaac
gtcaccctgatcgaccttcgaggctgcaagcagatcactcggaaggcctgcgagcacttc
atctcggacctgtccatcaacagcctctactgcctgtctgatgagaagttgatccagaaa
atcagctaa
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integrated database retrieval system
