Sarcophilus harrisii (Tasmanian devil): 100926346
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Entry
100926346 CDS
T02286
Name
(RefSeq) protocadherin gamma-C5 isoform X1
KO
K16497
protocadherin gamma subfamily C
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
shr04515
]
100926346
Cell adhesion molecules [BR:
shr04515
]
Cadherins
Protocadherins
100926346
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_tail
Cadherin_C_2
Cadherin_4
PepSY
Motif
Other DBs
NCBI-GeneID:
100926346
NCBI-ProteinID:
XP_012406913
UniProt:
A0A7N4NYZ5
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Position
2:374101732..374271262
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AA seq
940 aa
AA seq
DB search
MGPQVPPQLAWKWQVLYMLSLSGWGWVSGQLRYSVVEESELGTLVGNVALDVGLKMTELE
SRRLRLGSEESRRYFALNLASGALVVNQKIDRERLCGATTSCLLPVQVVTEHPLELFRVE
VEILDLNDNSPSFSTPEREVRISESAAPGARFPLDSAQDPDVGTNTVSSYMLSPNLHFSL
DVKTLKDGRLFPELVLERSLDREEQSNHQLVLTAVDGGTPALSGTTLVSITVLDINDNAP
VFEPSLLRVTLPENTPPGKLLVRLNATDADSGPNGQLEYSFADHTSEAARGLFSLDSRSG
EIRVLGPVDFEESSFYELHVRARDQGQPSMEGHSVVQIEVEDANDNAPEVLLTSLVNPVP
EDTPVGTVVGLFNVRDRDSGVNRRLTLEISPNLPFQIKPFENHYSLLTSERLDREATAHY
TIELLARDTGSPPLQTSLTILLNISDVNDNAPRFSQQFYSAYIAENRPPGSLLCTVAASD
PDAGDNARLSYSIVGSQIQGTPASSFIYINPEDGRIFAQRTFDYELLQVLQITVGVRDGG
YPALRANATLQVFVLDQNDNSPTVLHPRPGREAASPQRLRRSAPPGSLVTKVTAVDADSG
HNAWLSYSLLPQSTTPGLFQVSAHSGEVRTVRALQEGDSDTQLVVVLVRDNGEPALSSTA
TVLLVLQDEEAEELPQSSDFLTHPQEGSNLTLYLIVALGSVSLLSLVSFTFLLAKCLRRG
GNGEGCCKRQDSPSRDFYKQSSPNVQLSSDGTLKYMEVTLRPAHSQSHCYRTCFSPASDG
SDFTFLRPLSVPQPSALALEPDACLSRSNTLKEPGQQAPPNTDWRFSQAQRPGTSGSQNG
DEGGTWPNNQFDTEMLQAMILASANEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYR
QNVYIPGSTATLANAAGKRDGKAPAGGNGNKKKSGKKEKK
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggggccccaggtgcccccgcagctggcttggaaatggcaagtactgtacatgttgtcc
ttgtctggctggggctgggtgtctgggcagctccgatactcggtggtggaggagtctgag
ctggggacactggtgggaaatgtggctctggacgtgggcttgaagatgacagaactggag
agccgccggttgcgactgggctccgaggaaagccgccggtattttgccctgaatctggcc
agcggcgcccttgtggtcaaccagaagatcgaccgggaaaggctgtgcggagccaccacc
agttgcctgttgccagtgcaggtggttactgagcaccccctggagctgttccgtgtggag
gtggaaatcttagacctcaatgacaattcccccagcttcagcaccccagagcgagaggtg
agaatctctgaatcagctgctccaggggcgagatttcctctggacagtgcccaagatccc
gatgtgggtaccaacactgtgagctcttatatgctcagtcctaatctccatttttccctg
gatgtgaagacgcttaaagacgggaggttattccccgaactggtcctggagcgatccctg
gacagagaggagcaatcgaaccaccagctggtgctcactgcggtggatgggggcactccg
gccctttcgggcactactcttgtttccattactgtgctggacataaatgacaatgcgccg
gttttcgagccctctctgctaagggtgaccctcccggaaaacacgcccccgggtaagcta
ctagtccgcctcaatgccacagatgctgactcgggccccaacggccagctggagtattct
tttgcggaccacacatcagaggcggcccgggggctcttcagcctggattcccgcagtggc
gagatccgagtactggggcccgtggacttcgaggaatcgagtttctatgagctccacgtg
cgggcccgggaccaaggccagccctctatggagggccacagcgtggtgcagatagaggta
gaggatgccaacgacaatgcccctgaggtactgctcacctccttggtaaacccagtgccc
gaagacacacctgtgggtactgtggtgggactgttcaatgtgagggaccgagattcaggc
gtgaaccgacggttgaccctggaaatctctcctaatctgcccttccagattaagcccttt
gagaaccactactcactgctgaccagtgagagactggaccgggaggccactgctcactac
accatagagctgctggcccgagacactggctctcctccgctacaaaccagcctcaccatc
ctactcaatatctccgatgtcaacgacaatgcgcctcgattttcacagcagttctacagc
gcctatatcgcagagaatcggcctccaggctctctgctctgcacagtggcagcctcggac
cccgacgctggagacaacgcccgcctcagctattccatcgtaggaagtcagatccagggc
accccggcctcctccttcatctacattaatcccgaggacggacggatatttgcccagcgt
actttcgattatgagttactacaggtgcttcagatcactgtcggggttagggacgggggc
tacccggccctgcgcgccaacgccactctgcaagtgttcgttctagatcagaatgacaac
tcgccgacagtgttgcatcctcgtccaggccgagaggctgcctccccccagaggcttcgg
cgctcggctcccccgggttccttagtcaccaaggttacggcagtggacgccgactcgggc
cacaacgcctggctctcctactcgctgttgcctcagtcgacaaccccaggccttttccaa
gtgtcagctcacagcggagaagtccgcacagtccgtgccttgcaggagggtgactcagac
actcagctggtggtagttctggtgagggataatggcgagcccgcgctttcctccactgcc
accgtgcttctggtcctgcaggacgaggaagccgaggagctgccccaatccagcgacttc
ctcacgcacccgcaggagggctccaatctcaccctctaccttattgtagcactgggctcc
gtcagcctcctctccctggtctctttcacctttttgttagctaagtgcctgaggaggggc
gggaatggagaaggctgctgcaaacgccaagactcgccttccagggatttctataagcag
tctagtcccaatgtgcagctgagttctgacggcactcttaagtacatggaagtaactctt
cggccagctcattcacagagccattgctacaggacttgcttctctccggcctctgatgga
agcgacttcactttcctgaggccacttagtgtcccacagccctcggctttggccttggag
cctgacgcctgcctgtctcgctccaatacactgaaggagccgggccagcaagccccgccc
aacacggactggcgtttctctcaggcccagagaccaggcaccagtggctcccagaatggt
gatgaaggaggcacctggcctaacaatcaatttgacacagagatgcttcaggcaatgatc
ttggcttccgccaatgaagctgcggatggaagttcgacccttggcggtggggcaggcacc
atggggctgagtgcccgctatgggccccagttcaccctgcagcacgtgcctgactatagg
cagaacgtgtacatccctggcagcactgccaccttggccaacgctgctgggaagagagat
ggcaaggcccctgcaggtggcaatggaaacaagaagaaatctggcaagaaggagaagaag
tag
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