Sarcophilus harrisii (Tasmanian devil): 100926410
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Entry
100926410 CDS
T02286
Symbol
PKP1
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
shr04812
]
100926410 (PKP1)
Cytoskeleton proteins [BR:
shr04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
100926410 (PKP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
HEAT_EZ
HEAT
V-ATPase_H_C
HEAT_2
ARMC9_ARM
Arm_2
RIX1
Motif
Other DBs
NCBI-GeneID:
100926410
NCBI-ProteinID:
XP_031792980
Ensembl:
ENSSHAG00000000601
LinkDB
All DBs
Position
4:94213779..94293449
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AA seq
727 aa
AA seq
DB search
MTLNHSPLKTALAYECFQDQDNSTLALPSDQKMKTGTSGNQRVQEQVMMTVKRQKPKSSQ
SSTLTHSNRGSMYDGLTDNYNYGTTSRSSYYSKFQAGNGSWGYPIYNGTLKRDTDNRRFS
SYSQMESWNRQYNRGNCNTIGPGSDICFLQNIKASRSEPDLYCDPRGTLRKGYTGNKSHK
TTQNRYSFYSTCSGQKPVKKCPVRPPSCTSKQDPVYIPPISCNKDLSFGHSRASSKICSE
DIECSGLTIPKAVQFLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVSLLRS
PNQNVQQAAAGALRNLVFRSSTNKLETRRQNGIPEAVNLLRRTGSTEIQKQLTGLLWNLS
STDELKQELINEALPVLTDRVIIPFSGWCDGNSNMSRETVDPEVFFNATGCLRNLSSADA
GRQTMRNYPGLIDSLISYVQNCVAASRCDDKSVENCMCILHNLSYRLDAEVPTRYSQLEY
NARNTFTDKSSTGCFSNRNEKMMNNNYDLPLPEEETKPKGSNWLYHSDAIRTYLNLMGKS
KKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSSNSDVVRSGASLL
SNMSRHPVLHRAMGNQIFPEMTRLLSSQTGNTSNSGDIMSSACYTMRNLMTSLPQMAKQH
FTSSMLNNVVNMCRSGSPKAAEAARLLLSDMWSNKELQGVLRQQGFDRNMLGSLTGTNVL
RNFSSRF
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgaccctgaaccactctccgctcaagaccgccctggcctatgagtgcttccaggaccag
gacaactccacgctggctttgccgtcggatcagaagatgaagaccggcacgtcgggaaac
cagcgggtgcaggagcaggtgatgatgactgtcaagcggcagaagcccaagtcttctcag
tcgtccaccttgacccattccaaccgaggttccatgtatgatggtttaactgataattac
aactatgggaccaccagccggagttcctattactccaaattccaggcaggcaatggatct
tggggatatccgatctacaatgggaccctcaagagagacacagataatagacgtttcagc
tcttacagccagatggagagctggaaccgtcagtacaaccgaggcaactgcaacaccatt
ggtcctggcagtgacatatgcttcctgcagaacatcaaggccagtcggagtgaaccagac
ctgtactgtgacccccggggtactctgcgcaagggctatacaggcaacaagagccacaag
accacccagaatcgctacagcttttacagtacctgcagtggtcagaagcctgtcaagaag
tgcccagtgcgccctccttcctgcacatccaaacaagatcctgtctacattccacctatc
tcctgcaataaggacctctcctttggccactcaagggctagttccaagatctgcagtgaa
gacatagagtgcagtggcttgactattcccaaggctgtgcagttcctgagctctcaggat
gagaagtatcaggctattggggcctattacatccagcatacctgcttccaggatgaatct
gccaagcaacaggtataccagttgggaggaatttgcaaactggtgtctcttctccggagc
cccaatcaaaatgtccagcaagctgcagctggagccctccgcaacctggtcttcagaagc
tccactaacaagcttgaaaccaggagacagaatgggatcccggaggccgtgaacctcctg
aggaggactgggagcactgagatacagaagcagctcactgggctgctctggaatctgtct
tccactgatgagctgaagcaagaactcattaatgaagccctccctgttctgaccgatcgg
gttataatccccttctctggatggtgtgatggcaatagcaacatgtccagagaaacagtg
gacccagaagttttcttcaatgccaccggctgtttgaggaacctgagctcagctgatgct
ggacgccagactatgcgtaactacccagggctgattgattcccttatatcctatgtccag
aactgtgtggcagccagtcgctgtgatgacaagtctgtggaaaactgcatgtgtatcctg
cataatctgtcttaccgtctggatgctgaggtgcctacccgttatagccagctggagtat
aatgcccgcaatacctttactgacaagtcctccacaggctgtttcagcaacaggaatgaa
aagatgatgaataacaactatgacctacctttgcctgaggaggaaaccaaaccaaaggga
agtaactggctctatcactctgatgccattcgtacttacctgaacctcatgggcaagagc
aagaaagatgccaccctggaagcttgtgctggtgccctgcagaacctcactgctagcaaa
ggactgatgtccagtggcatgagccagttgattgggctgaaggaaaaagggttgcctcaa
attgcccgccttcttcaatcaagcaactctgatgtggtcaggtctggagcctccctcctg
agtaacatgtctcgacatcctgtgctgcacagagcaatggggaaccaaatattcccagag
atgactcgtctcctctctagccaaacgggcaacaccagcaactcaggggacatcatgtca
tctgcttgctacaccatgagaaacctgatgacctccttgccccagatggcaaagcagcac
ttcaccagcagcatgctgaataatgtggtcaacatgtgccggagtggttcaccaaaagcc
gcagaagctgcccgactccttctctctgatatgtggtcaaacaaggagctccagggtgtc
ctcagacagcaagggttcgataggaacatgctgggatccttaactgggaccaatgtccta
aggaacttcagctcccgattctaa
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