Sarcophilus harrisii (Tasmanian devil): 100926831
Help
Entry
100926831 CDS
T02286
Symbol
TRAF5
Name
(RefSeq) TNF receptor-associated factor 5 isoform X2
KO
K09849
TNF receptor-associated factor 5
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04064
NF-kappa B signaling pathway
shr04217
Necroptosis
shr04621
NOD-like receptor signaling pathway
shr04657
IL-17 signaling pathway
shr04668
TNF signaling pathway
shr05163
Human cytomegalovirus infection
shr05168
Herpes simplex virus 1 infection
shr05169
Epstein-Barr virus infection
shr05170
Human immunodeficiency virus 1 infection
shr05200
Pathways in cancer
shr05203
Viral carcinogenesis
shr05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
100926831 (TRAF5)
04668 TNF signaling pathway
100926831 (TRAF5)
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
100926831 (TRAF5)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
100926831 (TRAF5)
04657 IL-17 signaling pathway
100926831 (TRAF5)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100926831 (TRAF5)
05203 Viral carcinogenesis
100926831 (TRAF5)
09162 Cancer: specific types
05222 Small cell lung cancer
100926831 (TRAF5)
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
100926831 (TRAF5)
05168 Herpes simplex virus 1 infection
100926831 (TRAF5)
05163 Human cytomegalovirus infection
100926831 (TRAF5)
05169 Epstein-Barr virus infection
100926831 (TRAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shr04121
]
100926831 (TRAF5)
Ubiquitin system [BR:
shr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
100926831 (TRAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF3_RING
zf-TRAF_2
zf-C3HC4
zf-C3HC4_2
zf-RING_6
zf-RING_5
zf-RING_UBOX
zf-C3HC4_4
DUF4941
RING_XB3-XBAT31
FlaC_arch
Motif
Other DBs
NCBI-GeneID:
100926831
NCBI-ProteinID:
XP_023357720
LinkDB
All DBs
Position
4:106639497..106687254
Genome browser
AA seq
577 aa
AA seq
DB search
MTRFLLMLTCIHFFSPSMASSNFEEQGSASSNFLPQNSSNYISLDFEPNMEYRFVEQLEE
RYKCAKCHSVLHNPHQTGCGHRFCENCILSLRELNAVSICPVDKEIIKLQEVFKDNCCKR
EVLNLQVFCKNAPQCAAKIILGRYQDHLLQCLFQSVQCSNECCQEKVLRKDLKDHLGLHC
QFRKETCPYCKKDIVVMNLQNHKEKICPEYLVSCPNNCLQIIPRTKVDEHITVCPEVEQE
CPYKHYGCPVKEKRINLKEHENSALREHMLLVLEKNSRLEEQISDLHKNLELKESKIQQL
SETVKKFEKEFRQFVQLFGKNGNLLANTQVLASHIDKSAWLETQVRELLEVANQQQNRLD
LRPLMNTIDTIKEKITLLETYDQRLVTLEDQTNRHDVHINVHKAQLNKNEERFKMLEGTC
YNGKLIWKVTDYRMKKREATEGRTVSIFSQPFYTSRCGYRLCARAYLNGDGSGKGTHLSL
YFVVMKGEFDSLLQWPFKQRVTMMLLDQSGKKNHITEIFKADPNSSSFKRPDGEMNIASG
CPRFVAHSILENSKNTYIKEDTLFMKVVVDLSDLEDL
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgactagatttcttttgatgttgacatgtattcattttttctcccccagcatggcatcc
tcaaactttgaagaacaggggagtgcctccagcaacttccttccccagaattccagtaac
tacatatccttggactttgaacctaacatggagtacagatttgtggaacaattagaagaa
cgttataaatgtgcaaaatgccattctgtccttcacaacccacatcaaactggctgtgga
catcgattctgtgagaactgcattctatccttgagagaattaaatgcagtgtccatctgt
cctgtagacaaggagattatcaaactccaggaggtgtttaaagataattgctgcaaacga
gaagtgctcaacttacaggttttttgcaaaaatgctccccaatgtgctgccaagatcatt
ctggggcgataccaggatcacctcctacagtgtttatttcaatctgtgcaatgttctaat
gaatgctgtcaagaaaaagtccttcgaaaagatttgaaagatcacttgggtttacattgt
cagtttcgaaaggaaacatgtccatactgcaaaaaagatatagtggtgatgaatttacag
aatcacaaggaaaaaatttgcccagagtaccttgtatcttgtcccaataattgtttacag
attattccaagaactaaggttgatgagcatattactgtgtgtcctgaggtggaacaagaa
tgcccctataaacattatggctgtcctgtgaaggaaaaaaggataaatcttaaggaacat
gagaattctgctttaagagaacacatgcttctggttttagaaaagaattccagattagaa
gaacagatttctgacttgcacaagaacttagaactaaaagaaagtaaaattcagcagtta
agtgaaactgtaaagaaatttgaaaaggagtttaggcagtttgtacagctgtttggcaaa
aatggtaacttgctggcaaatacccaggttcttgccagtcacattgataaatctgcttgg
ttggaaacacaagtaagggagttattagaggtggctaaccagcagcaaaacagattggat
ctaagacctttgatgaatacaattgatactataaaggagaagatcactctgctggaaacc
tatgaccagagattggtcactttggaagaccaaacaaacagacatgatgtccacattaat
gttcataaagcccagctgaataaaaatgaagagcgatttaaaatgttagagggtacttgt
tataatggcaaattgatatggaaggtgacagactacaggatgaaaaaaagagaagcaact
gaaggccgcacagtgtccatattcagccagcctttctatactagccgctgtggctaccga
ctttgtgcaagagcttacttaaatggggatgggtcagggaaagggacacatttatcattg
tattttgtggtgatgaaaggggaattcgactcattgttgcagtggcctttcaaacagagg
gttaccatgatgcttttggaccagagtgggaaaaagaaccacattacagagattttcaag
gctgaccccaatagcagtagctttaaaaggcctgatggagagatgaacattgcatctggc
tgtcctcgctttgtggcccattccattctggagaacagcaagaatacctacatcaaagaa
gatacattgtttatgaaagtggtggtagatttgtctgaccttgaggacctgtaa
DBGET
integrated database retrieval system
