Sarcophilus harrisii (Tasmanian devil): 100927554
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Entry
100927554 CDS
T02286
Symbol
CACNA1F
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1F
KO
K04853
voltage-dependent calcium channel L type alpha-1F
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04010
MAPK signaling pathway
shr04020
Calcium signaling pathway
shr04022
cGMP-PKG signaling pathway
shr04024
cAMP signaling pathway
shr04260
Cardiac muscle contraction
shr04261
Adrenergic signaling in cardiomyocytes
shr04270
Vascular smooth muscle contraction
shr04723
Retrograde endocannabinoid signaling
shr04725
Cholinergic synapse
shr04726
Serotonergic synapse
shr04727
GABAergic synapse
shr04911
Insulin secretion
shr04912
GnRH signaling pathway
shr04921
Oxytocin signaling pathway
shr04924
Renin secretion
shr04925
Aldosterone synthesis and secretion
shr04927
Cortisol synthesis and secretion
shr04929
GnRH secretion
shr04934
Cushing syndrome
shr04935
Growth hormone synthesis, secretion and action
shr05010
Alzheimer disease
shr05020
Prion disease
shr05022
Pathways of neurodegeneration - multiple diseases
shr05207
Chemical carcinogenesis - receptor activation
shr05410
Hypertrophic cardiomyopathy
shr05412
Arrhythmogenic right ventricular cardiomyopathy
shr05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
100927554 (CACNA1F)
04020 Calcium signaling pathway
100927554 (CACNA1F)
04024 cAMP signaling pathway
100927554 (CACNA1F)
04022 cGMP-PKG signaling pathway
100927554 (CACNA1F)
09150 Organismal Systems
09152 Endocrine system
04911 Insulin secretion
100927554 (CACNA1F)
04929 GnRH secretion
100927554 (CACNA1F)
04912 GnRH signaling pathway
100927554 (CACNA1F)
04921 Oxytocin signaling pathway
100927554 (CACNA1F)
04935 Growth hormone synthesis, secretion and action
100927554 (CACNA1F)
04924 Renin secretion
100927554 (CACNA1F)
04925 Aldosterone synthesis and secretion
100927554 (CACNA1F)
04927 Cortisol synthesis and secretion
100927554 (CACNA1F)
09153 Circulatory system
04260 Cardiac muscle contraction
100927554 (CACNA1F)
04261 Adrenergic signaling in cardiomyocytes
100927554 (CACNA1F)
04270 Vascular smooth muscle contraction
100927554 (CACNA1F)
09156 Nervous system
04727 GABAergic synapse
100927554 (CACNA1F)
04725 Cholinergic synapse
100927554 (CACNA1F)
04726 Serotonergic synapse
100927554 (CACNA1F)
04723 Retrograde endocannabinoid signaling
100927554 (CACNA1F)
09160 Human Diseases
09161 Cancer: overview
05207 Chemical carcinogenesis - receptor activation
100927554 (CACNA1F)
09164 Neurodegenerative disease
05010 Alzheimer disease
100927554 (CACNA1F)
05020 Prion disease
100927554 (CACNA1F)
05022 Pathways of neurodegeneration - multiple diseases
100927554 (CACNA1F)
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
100927554 (CACNA1F)
05412 Arrhythmogenic right ventricular cardiomyopathy
100927554 (CACNA1F)
05414 Dilated cardiomyopathy
100927554 (CACNA1F)
09167 Endocrine and metabolic disease
04934 Cushing syndrome
100927554 (CACNA1F)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
shr04040
]
100927554 (CACNA1F)
Ion channels [BR:
shr04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
100927554 (CACNA1F)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
Ca_chan_IQ
GPHH
PKD_channel
FAM176
TPR_TTI1_C
Motif
Other DBs
NCBI-GeneID:
100927554
NCBI-ProteinID:
XP_031800961
Ensembl:
ENSSHAG00000001197
LinkDB
All DBs
Position
X:complement(82283438..82302488)
Genome browser
AA seq
2012 aa
AA seq
DB search
MEGADSGSGEPGDAHDGAQGPRGPGPEWGLATGPPPGGESHAGMPAGRRRAPPSKHKGLG
AGGIQRSPRALFCLSLTNPVRRFCITIVEWKPFDILILMTIFANCVALGVYVPFPEDDSN
AGNHNLEQVEYAFLVIFTVETALKIVAYGLVLHPNAYIRNGWNLLDFIIVVVGLFSVLLE
QGPPRPGDVPHTAGKPGGFDVKALRAFRVLRPLRLVSGVPSLHIVLNSILKALVPLLHIA
LLVLFVIMIYAVIGLELFLGRMHKTCFFRGSELEAEEDPSPCATPGSSGRQCLANHTECR
GRWAGPNGGITNFDNFFFAMLTVFQCVTMEGWTDVLYWVRRLAGRDAGSGPGPRGGGRSP
ASLAPQMQDAMGYELPWLYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLR
EKQQMEEDLRGYLDWLTQAEELGFRDQENAEAEGETEAEAKEDDAATRKAQQRVTLSEMI
HKRRSRLQWFSHSMSSHGTSAASPGHTVPLLPPLPASETGSMTAENGAEEDEEAGNACSR
NLAKLMKTRMCRRVRGANRALRSHCRHAVKSVACYWTVLLLVFLNTLTIASEHHGQPGWL
TQIQGETCRESPSPSGSPGGRSAGGAPQMGPGGPDAAFHPGVLCPSEYANKVLLCLFTVE
MLLKLYGLGPSAYAASFFNRFDCFVVCGGILETALVEAGAMQSLGISVLRCVRLLRIFKV
TRHWASLSNLVASLLNSMKSIASLLLLLFLFLIIFSLLGMQLFGGKFNFDQTNTKRSTFD
TFPQALLTVFQILTGEDWNVVMYDGILAYGGPFFPGMLVCVYFIILFICGNYILLNVFLA
IAVDNLAGGDASPPKSPGKEKSAEQGGSPQENGVLVPCGEDEDEEDQSEDGGTGEWGTGG
EASPLRVSLSAFWETKARHPDASVSLSQKRTWVLGYFDYAFTSIFTVEILLKMTAFGAFL
HQGSFCRNWFNLLDLLVVSVSLISFGIHSSAISVVKILRVLRVLRPLRAINRAKGLKHVV
QCVFVAIRTIGNILIVTSLLQFMFACIGVQLFKGKLYSCTDEAKHTPTECKGTFLVYPDG
DVAHPAMKERVWQNSDFNFDNVLSAMMALFTVSTFEGWPSLLYKAIDAHAEDEGPIYNYR
LEISIFFIVYIIIIAFFMMNIFVGFVIITFRAQGEQEYKNCELDKNQVSPRSPSDPGFGP
ALPADTPSPLRRCGILKARLFAYIPKNRHQHHVDLTPRPKYSFLSLSTIALHYEQTAPFN
YAMDILNMVFTGLFTVEMLLKIIAFNPKNYFCDAWNTFDALIVVGSVVDIAVTEVNNGGH
LGESSEDSSRISITFFRLFRVMRLVKLLSKGEGIRTLLWTFIKSFQALPYVALLIAMIFF
IYAVIGMQMFGKVALQDGTQINRNNNFQTFPQAVLLLFRCATGEAWQEIMLASLPGKRCD
PESDFGPGEEFTCGSNFAIVYFISFFMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHL
DEFKRVWSEYDPGAKGHIKHLDVVALLRRIQPPLGFGKLCPHRVACKRLVAMNMPLNADG
TVTFNATLFALVRTSLRIKTEGNLDRANQELRVVIRKIWKHTKPKLLNELIPPPEEEEVT
VGKFYATFLIQDYFRKFRRRKEKGLLGAEDLPSNSSALQAGLKTLQDLGPEIRQALTCDL
EEEAEDANLGEEPDRCPQDALEAPSPTWHDSAPSVSLTMPAEEEREAVRRPPGAHSHSAS
PKAEEPPLGAEGLAEQEEEEDHSPSQDRQAHRNDLTQRPHHILLPPPPRPPREPLGQSGK
PLGPHPRRRRLLPPTPATRKPSFTIQCMQRQGSCDDFPIPGTYQRGGSSGRHQAQGSWAT
PPQRGHLLYAPLLLVEEGRLQGDYAKGGSRGPLHTYARLHVPSTHIAPGPGKRGSADSLV
EAVLISEGLGLFARDPRFVALTKQEIADACRLTLDEMDSAACDLLALGTTGPPPAQPQMW
APMGSDEDEEALGATRAEEEELADEMVCIPVP
NT seq
6039 nt
NT seq
+upstream
nt +downstream
nt
atggagggagccgacagcgggtcaggggagcctggcgatgcccacgacggggctcaaggg
cccagggggccggggcccgagtggggtctggctaccggcccccctcccgggggagagagc
cacgccgggatgccagcagggcgcagaagagccccccccagcaaacacaagggcctgggg
gccggggggatacagcgttcccccagggccctcttctgcctgagcctcaccaacccggtg
aggaggttctgcatcaccatcgtggagtggaagccatttgacatcctcatcctcatgacc
atctttgccaactgtgtggccctcggggtctacgtccccttcccggaggacgactccaat
gcgggcaaccacaacctggagcaggtggagtacgccttcctggtgatcttcactgtggag
acagcgctgaagatcgtggcctacgggctggtgctgcatcccaacgcctacatccggaac
ggctggaacctgctggacttcatcatcgtggtcgtggggctcttcagtgtgctcctggag
cagggcccccccaggcccggggacgtgccccacacggcggggaagcccggaggctttgat
gtgaaggcgctgagggcgttcagagtccttcggcccctgcgactggtgtctggggtaccc
agcctgcacattgttctcaactccatcctgaaggccctggtccccctgctgcacatcgct
ctcctggttctctttgtcatcatgatctacgccgtcataggcctggagctcttcctgggc
cgcatgcataagacttgcttcttccgcggctcggagctggaggccgaggaggacccgtcc
ccctgtgccacccccggctcctcgggccggcagtgtctcgccaaccacacggagtgccgg
ggccgctgggcggggcccaacggggggatcaccaacttcgacaacttcttcttcgccatg
ctgaccgtcttccagtgcgtcaccatggagggctggaccgacgtgctctactgggtacgg
cgcctggcagggagggacgccgggtcggggccgggccccagaggcggcggccgctcacct
gcctccctcgccccccagatgcaggacgccatgggctacgagctcccctggctctacttc
gtcagcttggtcatctttggctctttcttcgtcctcaacctcgtgctgggagtcctgagt
ggggagttctcaaaggagcgcgagaaggccaaagcacggggggactttcagaaacttaga
gagaagcagcagatggaggaggacctccgcggctacctggactggctcacccaggccgaa
gaactgggcttcagggaccaggagaatgccgaagctgagggggagacggaggcagaggct
aaggaggacgacgcagccaccagaaaagcccagcaacgagtgaccctgtcggagatgatc
cacaagagacggagccgcctgcagtggttcagccactcgatgagcagccacggtacgagc
gcggcctctcccggtcacaccgttccccttctccctccgcttccagccagtgaaacaggt
tcaatgaccgcagagaacggggctgaggaagatgaagaggccgggaacgcctgtagcaga
aatctggccaagctcatgaagaccaggatgtgccgcagagtccggggggccaacagggcc
ctcaggtcccactgccgccacgccgtgaaatccgtggcctgttactggaccgtgctgctg
ctggtctttctgaacacgctgaccatcgcctccgagcaccatgggcagcccggctggctc
acccagatccagggtgagacctgccgggaaagcccgagtccctcgggaagccccgggggc
cggtcggcggggggagccccacaaatgggacccgggggacccgacgccgccttccatccc
ggggtcctctgcccctcagaatacgcaaacaaggtcctgctctgcctgttcacggtggag
atgctgctgaagctctacggcctgggcccgtccgcctacgcggcctccttcttcaaccgt
tttgactgctttgtggtgtgcggaggcatcctggagaccgccctggtggaggcgggggcc
atgcagtccctggggatctcggtcctgcgctgcgtgcgcctcctcaggatcttcaaggtg
accaggcactgggcgtccctcagcaacctggtggcctccctcctcaactccatgaagtcc
atcgcctcgctgcttctgctcctcttcctcttcctcatcatcttctccctcctggggatg
cagctctttgggggcaagttcaacttcgatcagaccaacaccaagcgcagcaccttcgac
accttcccccaagcgctgctcacggtcttccagatcctcacgggcgaggactggaacgtg
gtcatgtacgacgggatcctggcctatgggggccccttcttcccggggatgctggtctgc
gtctacttcatcattctcttcatctgtggcaactacatcctgctgaacgttttccttgcc
attgccgtggacaacctggccgggggagatgccagtccccccaagagcccaggaaaggag
aagagtgcggagcaaggtggcagcccccaggagaatggagtgttggtgccctgcggagag
gatgaagacgaggaagatcagagtgaggatggaggtactggggaatgggggactggggga
gaggcttcacctttacgagtttccctttctgccttctgggaaaccaaggcccggcatccc
gacgcctcagtgtccctgagccagaagaggacttgggtgcttgggtactttgactatgct
ttcacctccatcttcactgtcgagatcctgctcaagatgactgctttcggggccttcctc
caccaaggctccttctgccggaactggttcaatctgctggacctgctggtggtcagcgtg
tccctcatctcctttggcatccattccagcgccatctccgtggtcaagatcctgcgggtg
ctgcgggtgctccggcccctgcgtgccatcaatcgggccaagggcctcaagcacgtggtc
caatgcgtctttgtggccattcgcacaattggcaacatcctgatcgtgaccagcctgctc
cagttcatgttcgcctgcatcggcgtccagcttttcaagggcaaactgtacagctgcacg
gacgaagccaaacacacccccacagagtgcaaaggcaccttccttgtgtaccccgatgga
gatgtggctcacccggccatgaaggagcgtgtctggcagaacagcgacttcaactttgac
aacgttctgtcggccatgatggcgctgttcaccgtgtccacctttgaaggctggccttcg
ttgctctataaggccattgacgcccacgcggaggacgagggccccatctacaactaccga
ttggaaatctccatcttcttcattgtctatatcatcatcatcgccttcttcatgatgaac
atctttgtgggctttgtcatcatcaccttccgagcccaaggcgagcaagagtacaagaac
tgtgagctcgacaagaaccaggtctccccccggtccccgtctgaccccggatttggcccc
gccctccccgccgacaccccctctccgttgcgccggtgtggaatcctaaaagcccgcctt
ttcgcctacattcccaagaacaggcaccaacaccacgtcgacctaactccccgccccaaa
tactctttcctgtccctctcaacaattgctctgcactatgaacagacagctcccttcaat
tatgccatggatatcctcaacatggtcttcacgggcctgttcactgtggagatgttgctc
aagatcatcgccttcaatcccaagaattacttctgcgatgcgtggaacacttttgacgcc
ctgattgtggtgggcagcgtggtggacattgcagtcaccgaagtcaacaatggaggccat
ctgggtgagagctcggaggatagctcccggatctccatcaccttcttccgcctcttccgc
gtcatgaggctggtcaagcttctcagtaaaggggaagggatccgtactctcttgtggacc
tttatcaagtctttccaggctctcccttacgtggccctgctcatcgccatgatcttcttc
atctatgcagtcattggcatgcagatgttcgggaaagtggccctccaagatgggacccaa
atcaaccgcaacaataacttccagaccttcccccaggcggtgctcctcctgttccggtgt
gccaccggggaggcctggcaagagatcatgctggccagcctgccggggaagcgctgtgac
cccgagtcggactttggccccggggaggagttcacctgtgggagtaacttcgccattgtc
tatttcatcagcttcttcatgctctgtgcattcctgatcatcaacttattcgtggccgtc
atcatggacaacttcgattacctgacacgggactggtccatcctcggcccccaccacctg
gatgagttcaagagggtctggtctgagtacgaccccggggccaagggccacatcaagcat
ctggacgtcgtggccttgctccggcgcatccagcctccattggggtttgggaagctctgc
cctcaccgtgtggcctgcaagagactggtggccatgaacatgcccttgaatgcggatggg
acggtgacttttaacgccaccctcttcgccctggtccggacgtctctgaggattaagacc
gaggggaacctggacagggccaatcaggagctccgggtcgtcattcgcaagatctggaag
cacaccaagcccaagctgctgaatgagctcattccacctcctgaagaggaggaagtgact
gtcgggaagttttatgccacgttcttgatccaggattatttccgaaagttccggcgtcgc
aaagagaagggcctcctgggggccgaggacttgcccagcaactcatctgccctccaggcc
ggcctgaagacgctgcaggacctgggcccggagatccgccaggcccttacgtgcgacctg
gaagaagaagcggaggacgccaacctcggggaggagccggacaggtgcccacaggatgcc
ctggaagctccctcgccgacctggcacgattctgccccttctgtgtctctcacgatgcct
gccgaggaggagagggaagcggtgagaagacctcctggagcccactctcacagtgcttcc
cccaaggcagaagagcctcccttgggagccgagggcttggcagagcaggaggaagaggag
gatcactcccctagccaggacagacaagcgcatcgaaatgatctcacccagaggccccat
cacatcctcctcccaccgcctcctcgtcctcctcgggagcccctggggcagtcgggcaag
ccactgggcccacatcctcgccgtcgccgcctgctgcccccaacgcctgccacccggaag
ccctctttcaccatccagtgcatgcagcgccaagggagctgcgatgacttcccgatcccc
ggaacctatcaacgtgggggatcttccggccgccaccaggcccagggttcgtgggccacc
cctcctcagcggggccacctgctctacgcacccctgctcctggtggaggagggcaggctc
cagggggattatgccaaaggggggtcccggggcccgctgcacacctacgcccgcctgcac
gtgcccagcacccacatagcacctggcccagggaagaggggcagtgctgacagcctagtg
gaagctgtgctgatctctgagggcctgggcctctttgcccgtgaccctcgcttcgtggcc
ctgacaaagcaggagatcgctgacgcctgccggctgaccctggacgagatggacagtgcc
gcctgtgacctgctggccctggggaccaccgggcccccccccgcccagccccaaatgtgg
gctcccatgggcagtgatgaagacgaggaggccctcggggccacgcgggcggaggaggaa
gaactggcagacgagatggtctgcatccctgtcccttag
DBGET
integrated database retrieval system
