Sarcophilus harrisii (Tasmanian devil): 100927884
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Entry
100927884 CDS
T02286
Symbol
GRIA2
Name
(RefSeq) glutamate receptor 2 isoform X1
KO
K05198
glutamate receptor 2
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04024
cAMP signaling pathway
shr04080
Neuroactive ligand-receptor interaction
shr04713
Circadian entrainment
shr04720
Long-term potentiation
shr04723
Retrograde endocannabinoid signaling
shr04724
Glutamatergic synapse
shr04728
Dopaminergic synapse
shr04730
Long-term depression
shr05014
Amyotrophic lateral sclerosis
shr05016
Huntington disease
shr05017
Spinocerebellar ataxia
shr05022
Pathways of neurodegeneration - multiple diseases
shr05030
Cocaine addiction
shr05031
Amphetamine addiction
shr05033
Nicotine addiction
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04024 cAMP signaling pathway
100927884 (GRIA2)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100927884 (GRIA2)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
100927884 (GRIA2)
04728 Dopaminergic synapse
100927884 (GRIA2)
04720 Long-term potentiation
100927884 (GRIA2)
04730 Long-term depression
100927884 (GRIA2)
04723 Retrograde endocannabinoid signaling
100927884 (GRIA2)
09159 Environmental adaptation
04713 Circadian entrainment
100927884 (GRIA2)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100927884 (GRIA2)
05016 Huntington disease
100927884 (GRIA2)
05017 Spinocerebellar ataxia
100927884 (GRIA2)
05022 Pathways of neurodegeneration - multiple diseases
100927884 (GRIA2)
09165 Substance dependence
05030 Cocaine addiction
100927884 (GRIA2)
05031 Amphetamine addiction
100927884 (GRIA2)
05033 Nicotine addiction
100927884 (GRIA2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
shr04040
]
100927884 (GRIA2)
Ion channels [BR:
shr04040
]
Ligand-gated channels
Glutamate (ionotropic)
100927884 (GRIA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Peripla_BP_6
DUF2061
Motif
Other DBs
NCBI-GeneID:
100927884
NCBI-ProteinID:
XP_031798920
Ensembl:
ENSSHAG00000002412
LinkDB
All DBs
Position
6:83542045..83709385
Genome browser
AA seq
901 aa
AA seq
DB search
MQKIMHISVFLSPVFWGLIIGVSSNSIQIGGLFPRGADQEYSAFRVGMVQFSTSEFRLTP
HIDNLEVANSFAVTNAFCSQFSRGVYAIFGFYDKKSVNTITSFCGTLHVSFITPSFPTDG
THPFVIQMRPDLKGALLSLIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQVTAINV
GNINNDRKDETYRSLFQDLEVKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYIIANL
GFTDGDLSKIQFGGANVSGFQIVDYEDSLVSKFVQRWSTLEEKEYPGAHTSTIKYTSALT
YDAVQVMTEAFRNLRKQRIEISRRGNAGDCLANPAVPWGQGVEIERALKQVQVEGLSGNI
KFDQNGKRINYTINIMELKTNGPRKIGYWSEMDKMVVTLTEIPSGNDTSGLENKTVVVTT
ILESPYVMMKKNHEMLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADTKI
WNGMVGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLD
PLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWHTEEFEDGRETQSNESTNEFGIFNSLWF
SLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL
SKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGK
YAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLRTPVNLAVLKLSEQGVL
DKLKNKWWYDKGECGAKDSGSKEKTSALSLSNVAGVFYILVGGLGLAMLVALIEFCYKSR
AEAKRMKMTLSDAMRNKARLSITGSTGENGRVMTPEFPKAVHAVPYVSPGMGMNVSVTDL
S
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagattatgcatatttctgtcttcctttctcctgttttttggggactgattatt
ggtgtctcttctaacagcatacaaataggggggttatttccaaggggcgccgatcaggaa
tacagtgcatttcgggtaggaatggttcagttttccacttcagagtttagactgacgccc
catatcgacaatctggaggtagccaacagctttgcagtcaccaatgctttctgctcccag
ttttcaagaggagtttatgctatttttggattttatgacaagaagtctgtaaataccatt
acatccttttgtggaactcttcatgtctccttcatcactcccagcttcccaacagatgga
acacatccatttgtcattcaaatgagacctgacctcaaaggagctcttcttagtttgatt
gaatactaccaatgggacaaatttgcatatctttatgacagtgatagaggcttatcaaca
ttgcaagctgtcctggattctgctgctgaaaagaaatggcaagtgactgctatcaatgta
gggaatattaacaatgacaggaaagatgaaacctaccggtcgctgtttcaagatctagag
gtaaaaaaggaaaggcgcgtaatccttgactgtgagcgagacaaagtcaacgacattgta
gaccaagttattaccattggaaaacatgttaaggggtaccattacatcattgcaaatctg
ggatttactgatggggatttatccaaaattcaatttggtggagcaaatgtctcaggattt
cagattgttgactatgaagattccctagtgtccaaatttgtacagagatggtcaacactg
gaggaaaaggaatatcctggagctcatacaagtacaattaagtatacttctgctctgact
tatgatgctgtccaggtgatgactgaagctttccgcaatctgcgtaagcaaaggattgaa
atctccagaagaggaaatgctggagactgtcttgcaaaccctgctgtgccctggggacaa
ggagtagagatagaaagggcactaaaacaggttcaagtggaaggtctttcaggaaatata
aagtttgatcagaatggaaaaagaataaattatacaattaacatcatggaactcaaaact
aatgggcctcggaagattggatattggagtgaaatggacaaaatggtggtgacacttact
gaaatcccttcagggaatgacacttcgggactagagaataagactgttgttgtcaccaca
atcttggaatcaccatacgtcatgatgaagaaaaatcatgaaatgctagaaggcaatgag
cgatatgaaggctattgtgtggacttggctgcagagattgccaaacactgtggattcaaa
tacaagttaacaattgttggggatggcaagtatggggccagggatgcagatacaaaaatt
tggaacggaatggttggagagcttgtatatgggaaagctgatattgcaattgctccatta
actattacattagtgagagaagaggtgattgacttttccaagccctttatgagcctcggg
atctcaattatgatcaagaagcctcagaagtccaaaccaggagtgttttcatttctcgat
cccctagcctatgaaatctggatgtgcattgtctttgcctacattggggtcagtgtagtt
ttattcctggtcagcagattcagcccctacgagtggcacactgaggagtttgaagatgga
cgagaaacacaaagtaacgagtcaactaatgaatttgggatatttaatagtctctggttt
tccctgggtgcctttatgcagcaaggatgcgatatttcgccaagatccctgtctgggcgc
attgttggaggtgtatggtggttctttaccctcatcataatctcatcctacacggctaat
ttagctgccttcctgacggtagagaggatggtatctcccattgaaagtgctgaggatctt
tctaagcaaacagaaattgcttatggaacattagattctggatccacaaaagagtttttt
aggagatctaaaattgcagtgtttgataaaatgtggacatatatgagaagtgccgagcct
tctgtatttgtgaggactacagcagaaggagtagctcgggtacggaagtcgaaaggaaag
tacgcttatttgctggagtccaccatgaacgagtacatcgagcaaagaaaaccctgtgac
accatgaaagttggtgggaacttggattccaaaggctatggcatcgcaacacctaaagga
tcctcattaagaaccccagtaaatcttgcagtattgaaactcagtgagcaaggcgtctta
gacaagctgaaaaacaaatggtggtacgataaaggggagtgtggagccaaggactctgga
agtaaggaaaagaccagtgccctcagcttgagcaacgttgctggagtattctacattctt
gtcgggggacttggtttagccatgctggtggctttgattgagttctgttacaagtcaaga
gcagaggcgaaacgaatgaagatgaccttgagtgatgccatgaggaacaaggcgaggctg
tcaattacaggaagtactggagaaaatggacgtgttatgactccagagtttcccaaagca
gtgcatgctgtcccttacgtgagtcctggcatgggaatgaatgtcagtgtgactgatctc
tcgtga
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