Sarcophilus harrisii (Tasmanian devil): 100928719
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Entry
100928719 CDS
T02286
Symbol
PSEN2
Name
(RefSeq) presenilin-2 isoform X1
KO
K04522
presenilin 2 [EC:3.4.23.-]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04330
Notch signaling pathway
shr04722
Neurotrophin signaling pathway
shr05010
Alzheimer disease
shr05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
100928719 (PSEN2)
09150 Organismal Systems
09156 Nervous system
04722 Neurotrophin signaling pathway
100928719 (PSEN2)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
100928719 (PSEN2)
05022 Pathways of neurodegeneration - multiple diseases
100928719 (PSEN2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
shr01002
]
100928719 (PSEN2)
Peptidases and inhibitors [BR:
shr01002
]
Aspartic peptidases
Family A22: presenilin family
100928719 (PSEN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Presenilin
DUF6541
Motif
Other DBs
NCBI-GeneID:
100928719
NCBI-ProteinID:
XP_003767807
Ensembl:
ENSSHAG00000010004
UniProt:
G3W889
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All DBs
Position
4:complement(385750389..385786657)
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AA seq
456 aa
AA seq
DB search
MITFMNSDSEEEVCNERTSLMSTESPPARSYHEGICTEERDKEIQEKRQGSLCNHGNADQ
CTPDSRGSSRSSSLEEDEEEEELTLKYGAKHVIMLFVPVTLCMVVVVATIKSVRFYTEKN
GQLIYTPFTEDTPSIGQRLLNSVLNTLIMISVIVVMTIFLVVLYKHRCYKFIHGWLILSS
LMLLFLFTYIYLGEVLKTYNVAMDYPTLFLVIWNFGAVGMICIHWKGPLVLQQAYLIMIS
ALMALVFIKYLPEWSAWVILGAISVYDLVAVLCPKGPLRMLVETAQERNEPIFPALIYSS
AMVWTVGMAKVDTPTKGALPKDQEQDEDSSDTSGDHSYSETYDSPRCTPLHVPSYAVEEL
EEEEERGVKLGLGDFIFYSVLVGKAAATASGDWNTTLACFVAILIGLCLTLLLLAVFKKA
LPALPISITFGLIFYFSTDNLVRPFMDTLASHQLYI
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgatcacattcatgaattcagacagtgaagaggaagtctgcaatgagaggacatccctg
atgtcaacagagagccccccagcacggtcttatcatgaagggatctgtacagaagaacgg
gacaaggagatccaagagaaacgccaaggtagcttgtgtaaccatggcaatgccgaccag
tgtacccccgacagcaggggctcatcgagaagcagcagcttggaggaggatgaagaggaa
gaagagctaacgctcaaatatggggcaaagcacgtgatcatgctctttgtgccggttact
ctctgcatggtggtcgtcgtggcaaccattaagtcagtccgcttctatacagagaagaat
ggacagctcatctacacaccctttacagaagataccccttctattggtcagcgcttgctc
aactcggtgctaaacaccctcatcatgatcagtgtcattgtggtcatgacgatattcctg
gttgtgctgtacaagcatcgttgctacaagtttatccatggctggttgatcctgtcttct
ctgatgctgctcttcctcttcacctacatttatcttggggaagtgctcaagacttacaat
gtggctatggactacccaacccttttcttggtcatctggaactttggggcagtgggaatg
atctgtatccactggaaaggtcccctggtgctgcagcaggcctacctcattatgatcagt
gctctcatggccttggtcttcatcaagtacctcccagaatggtcagcctgggtcatcctg
ggagccatctctgtgtatgatcttgtggctgtgctgtgtcctaaagggcccttgaggatg
cttgtagaaactgctcaggaaagaaatgaacctatatttcctgcactcatatattcatct
gccatggtatggactgttggcatggcaaaagtggatacaccaacaaagggagccctcccc
aaggaccaagagcaagatgaagactcaagtgacacttctggggaccactcttactctgaa
acctacgactctccgaggtgcaccccactccatgtgccttcctatgcagtggaggagctg
gaagaagaggaggaaaggggagtgaagctgggcctgggagacttcattttctacagtgtt
cttgtgggcaaggcggcagccacagccagtggggactggaacaccacactagcctgcttt
gtcgccattctcatcggtctatgtttgacactcttgctgctggccgtgttcaagaaggcc
ttgcctgccctgcccatctccatcaccttcggtctcatcttctacttctccactgacaac
cttgtgaggcctttcatggataccctggcatcccaccagttgtatatttag
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