KEGG   Sarcophilus harrisii (Tasmanian devil): 100930980
Entry
100930980         CDS       T02286                                 
Name
(RefSeq) rano class II histocompatibility antigen, A beta chain isoform X1
  KO
K06752  MHC class II antigen
Organism
shr  Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04145  Phagosome
shr04514  Cell adhesion molecules
shr04612  Antigen processing and presentation
shr04640  Hematopoietic cell lineage
shr04658  Th1 and Th2 cell differentiation
shr04659  Th17 cell differentiation
shr04672  Intestinal immune network for IgA production
shr04940  Type I diabetes mellitus
shr05140  Leishmaniasis
shr05145  Toxoplasmosis
shr05150  Staphylococcus aureus infection
shr05152  Tuberculosis
shr05164  Influenza A
shr05166  Human T-cell leukemia virus 1 infection
shr05168  Herpes simplex virus 1 infection
shr05169  Epstein-Barr virus infection
shr05310  Asthma
shr05320  Autoimmune thyroid disease
shr05321  Inflammatory bowel disease
shr05322  Systemic lupus erythematosus
shr05323  Rheumatoid arthritis
shr05330  Allograft rejection
shr05332  Graft-versus-host disease
shr05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:shr00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    100930980
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100930980
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    100930980
   04612 Antigen processing and presentation
    100930980
   04658 Th1 and Th2 cell differentiation
    100930980
   04659 Th17 cell differentiation
    100930980
   04672 Intestinal immune network for IgA production
    100930980
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    100930980
   05164 Influenza A
    100930980
   05168 Herpes simplex virus 1 infection
    100930980
   05169 Epstein-Barr virus infection
    100930980
  09171 Infectious disease: bacterial
   05150 Staphylococcus aureus infection
    100930980
   05152 Tuberculosis
    100930980
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    100930980
   05140 Leishmaniasis
    100930980
  09163 Immune disease
   05310 Asthma
    100930980
   05322 Systemic lupus erythematosus
    100930980
   05323 Rheumatoid arthritis
    100930980
   05320 Autoimmune thyroid disease
    100930980
   05321 Inflammatory bowel disease
    100930980
   05330 Allograft rejection
    100930980
   05332 Graft-versus-host disease
    100930980
  09166 Cardiovascular disease
   05416 Viral myocarditis
    100930980
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    100930980
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:shr04147]
    100930980
Exosome [BR:shr04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100930980
  Exosomal proteins of epithelial cells
   100930980
  Exosomal proteins of breast milk
   100930980
SSDB
Motif
Pfam: C1-set Ig_3 Ig_2 C2-set_2 Marek_A ig
Other DBs
NCBI-GeneID: 100930980
NCBI-ProteinID: XP_012405800
Ensembl: ENSSHAG00000000770
UniProt: B3F371
LinkDB
Position
4:complement(271253278..271326054)
AA seq 132 aa
MAPLGHHNLLVCSVSGFYPGDIEVRWFLNGREETAGVVSTGLMGNGDWTYQILVMLEMTP
RHGDVYTCHVEHASLQEPVLLDWKAQSESAQSKMLSGVGGLVLGLIFFGVGLIVHKRSQK
GNRGSQPAGLLS
NT seq 399 nt   +upstreamnt  +downstreamnt
atggctcccctgggacaccacaacctgcttgtctgctccgtcagcggtttctatcccggg
gacatcgaggtccggtggttcctgaatgggcgggaggagacggcaggggtggtgtccacg
ggcctgatgggcaatggagactggacctaccagatcctggtgatgctggagatgaccccc
cggcacggagatgtctacacctgccacgtggagcacgccagccttcaggaacccgtcctc
ttggactggaaagcccagtctgagtctgcccagagtaagatgctgagcggagtcgggggc
ctcgtgctggggctgatcttctttggggtcggcctcattgtccacaagaggagccagaaa
ggcaatcggggttcacaaccagcagggctcctgagctga

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