KEGG   Sarcophilus harrisii (Tasmanian devil): 100931083
Entry
100931083         CDS       T02286                                 
Symbol
SMNDC1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30 isoform X1
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
shr  Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:shr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100931083 (SMNDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:shr03041]
    100931083 (SMNDC1)
Spliceosome [BR:shr03041]
 Complex A
  U2 snRNP components
   U2 related factors
    100931083 (SMNDC1)
 Complex B
    100931083 (SMNDC1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    100931083 (SMNDC1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR
Other DBs
NCBI-GeneID: 100931083
NCBI-ProteinID: XP_003755438
Ensembl: ENSSHAG00000015189
UniProt: G3WR38
LinkDB
Position
2:complement(565618376..565645741)
AA seq 238 aa
MSEDLAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIELTKDLLSTQPSETLAS
SDSFASAQPTHSWKVGDKCMAVWSEDGQCYEAEIEEIDEENGTAAITFAGYGNAEVTPLL
NLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQ
FNNRAYSKNKKGQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtctgaagatctagcaaagcagctggctagctacaaggctcagcttcaacaagttgag
gcagcattatctgggaatggagaaaatgaagacttgctaaaattgaaaaaagatttgcaa
gaagttatagaactaaccaaagatcttctttcaacccaaccttcggaaacccttgcaagt
tcagacagttttgcttctgctcagcccactcactcctggaaagtaggagacaaatgtatg
gcagtctggagtgaagatggacagtgttatgaagcagagattgaagagatagatgaagaa
aatgggactgctgccatcacatttgctggttatggtaatgctgaagtcacacctctacta
aatttgaagccagtagaagaaggaaggaaggcaaaagaagacagtggaaataagcccatg
tcaaaaaaagaaatgattgcccagcaacgagaatataaaaagaagaaggctttgaaaaaa
gctcaaagaataaaagaacttgaacaggaaagagaggaccagaaggtgaaatggcaacag
ttcaacaatagagcctattctaaaaataaaaaaggccaggtaaaaaggagtatttttgcc
tcacctgagagtgtaactggcaaagttggagtaggaacttgtggaattgctgataaaccc
atgacacagtatcaggatacctctaaatacaatgtcaggcacttgatgcctcagtaa

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