Sarcophilus harrisii (Tasmanian devil): 100931290
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Entry
100931290 CDS
T02286
Symbol
TCF3
Name
(RefSeq) transcription factor E2-alpha isoform X1
KO
K09063
transcription factor E2-alpha
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04550
Signaling pathways regulating pluripotency of stem cells
shr05166
Human T-cell leukemia virus 1 infection
shr05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
100931290 (TCF3)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
100931290 (TCF3)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
100931290 (TCF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shr03000
]
100931290 (TCF3)
Transcription factors [BR:
shr03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Ubiquitous (class A) factors
100931290 (TCF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
Response_reg_2
CDC45
bHLH_IRO3
Motif
Other DBs
NCBI-GeneID:
100931290
NCBI-ProteinID:
XP_031803997
Ensembl:
ENSSHAG00000013735
LinkDB
All DBs
Position
1:666764690..666859186
Genome browser
AA seq
731 aa
AA seq
DB search
MVLLPEAKAVSQPPLFKKKKKNTLNNLAFSSKYHIMLRNPECELVPVSSGTAVGLVSWKE
QGGELVFQQKSGLAGRVRVRELAAAFVKCFSPHLLPSHWAGAMEIVAGTSCQREHPRSIL
GAGLEERTGSGSWGTSGDQINSSFDQGRAYSEGSHYTEPSHNSISSTSFLGSGLVGKNSE
RASYSAFGRDPGMPGLSQAGFLPSELGINSPSTLSPTGVKGGSQYYSYPNNPRRRAADSN
LDGQPKKVRKVPPGLPSSVYPSNSGDDYSRDPAGYPPSKPASTVYPAAFYMPDGLHNSAD
LWSPSGTMNQSNYAPPMLGSSSSPLPQSGGFSNLHQHERMNYQMHSGEVNGGIPSVSGFS
SATTPYGVSSHTPPISGTESIMGNRGTTAGSSGDALGKALASIYSPDHSSNNFPSNPSTP
VGSPQGLAGTSQWPRTGAPGALSPSYEGTLHNLQNKMEDHLDEAIHVLRSHAVGQTGDMH
SILGGAPGHSGAVGTLGQAFSTSVMPLVGRHSSLVGGSHTEDGLPSNSSLLHNHVSLPSQ
PGSLPDLTRQQDAYSGLTSGLGRAGASSGTSEIKREEKEDEENTSVADNSEEEKKEMKPS
RTRTSQDEDEEDELLPPEQKAEREKERRVANNARERLRVRDINEAFKELGRMCQLHLNSE
KPQTKLLILHQAVSVILNLEQQVRERNLNPKAACLKRREEEKVSGVVGDPQMALSAGHPG
LGDGHNPVGHM
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggtattacttcctgaggccaaggctgtctcccagccccctctatttaaaaaaaaaaaa
aaaaacacccttaacaacttggctttttcttccaagtatcatattatgctcagaaacccg
gagtgtgagttggtgcccgtgagctccggaactgctgtgggactggttagctggaaggag
caggggggagagctggtcttccaacagaagtccggactggcaggcagggtcagggtcagg
gagcttgctgctgcttttgtcaagtgtttcagccctcatcttctgccctcccactgggca
ggtgccatggaaatagtggctggaacctcctgccagagggagcacccgaggtccatccta
ggagctggtttggaggagagaacaggctctgggtcatggggaacatcaggagatcaaatc
aattcctcattcgaccaaggaagggcttacagtgaaggttctcactacacagagccctct
cacaatagcatatcttcaacatcattcctgggatctggacttgtagggaagaacagcgag
agagcttcatattcagcctttgggagagaccctgggatgcctggactcagccaggctggc
ttcctgcctagtgagctgggaatcaacagcccgagcacgctgtcccccacaggggtcaag
ggaggctcacagtattactcgtatcccaacaaccctcgacggagggcggccgacagcaac
cttgatgggcaacctaagaaggtgcggaaggtgcctccaggactcccctcctcggtgtat
ccctccaactcaggtgatgactatagccgagaccccgcgggataccctccctccaaacct
gccagtactgtgtaccctgcagccttctacatgccagatggactacacaactccgcggac
ctgtggagcccgtcgggcaccatgaaccagtccaactacgccccccccatgctgggcagc
tcctcctcccctctccctcagagtggcggcttcagtaacctacaccagcatgaacggatg
aactaccagatgcattcaggggaagtgaatggtgggatcccgtcagtgtccggattctcc
tccgccaccactccctatggtgtctccagccacacgccgccaattagcgggacagagagc
atcatgggtaacagagggactacagctggtagctctggagacgcacttgggaaggcgctg
gcttcgatctattccccagaccactcaagcaataactttccttctaacccctcgaccccg
gtgggttcccctcagggacttgcaggcacttcccagtggccccgaacaggagcacccggt
gccttatctcccagctacgaaggaactctgcacaatttgcaaaacaagatggaggatcac
ttagatgaagccatccacgtgctgaggagccacgctgtggggcagacgggcgacatgcac
agcatcctggggggcgcgccggggcacagcggcgccgtgggcaccctgggccaggccttc
tccacctccgtcatgcctctggtggggcggcactccagcctggttgggggcagccacacc
gaagatggcctccccagcaactccagcctcctccacaaccatgtgtcgctcccctcccag
cctggctcgctccccgacctcactcggcagcaggacgcctatagcggcttgacgtcgggg
ctgggaagagccggcgcttcttcaggaaccagtgaaatcaagagggaggagaaggaagac
gaggagaacacgtccgtggcggacaactcagaggaggagaagaaggagatgaagccgtct
cggaccagaacaagtcaagatgaggatgaggaggacgaacttctccccccagagcagaaa
gcggagagagagaaggagaggcgggtggccaataacgcccgcgagcgcctccgtgtccgc
gacatcaacgaggcctttaaagagctcggccgcatgtgccaactccaccttaacagtgaa
aaaccgcagaccaaactgctaattctccaccaggccgtgtcggttattttgaacctggaa
cagcaagtgcgagagcgcaatctgaaccccaaagctgcctgcttgaagcgtcgggaagaa
gagaaagtgtctggagtggtcggtgatcctcagatggcactttcagctggtcatccaggc
ctgggcgatggtcataaccccgttggacatatgtaa
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