Sarcophilus harrisii (Tasmanian devil): 100931784
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Entry
100931784 CDS
T02286
Symbol
SLIT1
Name
(RefSeq) slit homolog 1 protein isoform X1
KO
K06838
slit 1
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04360
Axon guidance
shr04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
100931784 (SLIT1)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100931784 (SLIT1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
shr00536
]
100931784 (SLIT1)
Glycosaminoglycan binding proteins [BR:
shr00536
]
Heparan sulfate / Heparin
Axon guidance molecules
100931784 (SLIT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_2
hEGF
Laminin_G_1
LRRNT
LRRCT
LRR_1
LRR_9
EGF_TEN
LRR_14
EGF_DL_JAG
EGF_Teneurin
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
100931784
NCBI-ProteinID:
XP_031812046
Ensembl:
ENSSHAG00000018586
UniProt:
G3X2Q4
LinkDB
All DBs
Position
2:complement(590431666..590677474)
Genome browser
AA seq
1534 aa
AA seq
DB search
MALNHRGGHSAWRRPEVWLLVWNALCQLGARGCPALCTCTGTTVDCHGMGLRAVPKNIPR
NTERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMRDLERLRLNRNHL
HLLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEDGAFRALR
GLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQ
CSGPASLRSLNVAEVQKSEFSCSGQGEATRSPVCTLSLGSCPPMCACSNGIVDCRGKGLT
AIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQGLRSLNS
LVLYGNKITDLPKGVFGGLYTLQLLLLNANKINCIRADAFQDLQNLSLLSLYDNKIQSLA
KGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPRRLANKRIGQIK
SKKFRCSAKEQYFLPGTEDYRLNSECNSDAVCPHKCRCESNVVECSNLKLTKIPERIPQS
TAELRLNNNEISILEATGIFKKLPHLKKINLSNNKVSEIEDGAFEGAASVSELHLTVNQL
ESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQISTISPGAFDTLQ
SLSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQNPDFLRQIPLQDVAFPDFRCEE
GQEEGGCFPRPQCPQECTCLDTVVRCSNKHLRGLPKGIPKNVTELYLDGNQFTLVPAQLS
TFKYLQLVDLSNNKIGSLSNSSFTNMSQLTTLILSYNSLQCIPPLAFEGLRSLRLLSLHG
NDISTLREGIFTDVTSLSHLAIGANPLYCNCHLRWLSSWVKTGYKEPGIARCAGPPDMEG
KLLLTTPAKKFECQGPPSITVQAKCNPCLSNPCQNQGTCQNDPLDSYRCTCPSGYKGRDC
EMSLNSCSSGPCENGGTCHSSQAGEGSGFTCSCPVGFEGPTCGVNTDNCRDHACENGGIC
VDGINNYTCLCPFQYTGRVCEQLVDFCSLNLNPCQHGAKCVGTPEGPKCECTPGYVGDNC
SINYNDCIDHQCQNGAHCVDEVNGYSCLCEEGYSGQLCEMASQPPKPLSPCEGTECQNGA
NCVDLGNRPVCQCLPGFGGPECEKLLSVNFVDKDTYLQFTDLQNWPRANITLQVATAEDN
GILLYNGDNDHIAVELYQGHVRVSYDPGSYPSSAIYSAETINDGQFHTVELVTFDQMVNL
SIDGGSPMTMDNFGKHYTLNSEAPLYVGGMPVDVNSAAFRLWQILNGTSFHGCIRNLYIN
NELQDFTKTQMQPGVVPGCEPCRKLYCLHGICQPNAAHGPVCHCEPGWGGPHCDQQVGNP
CQGHKCVHGTCLPLDALSYSCQCQDGYTGALCNQPGEPPDPCENLHCLHGHCQISTEGAA
HCVCDSGFAGELCEQESKCQGDPVRDFHQVQRGYAICQTTRPLSWVECRGSCPGQGCCTG
LRMKRRRFTFECSDGSSFVEEVEKAIKCGCASCM
NT seq
4605 nt
NT seq
+upstream
nt +downstream
nt
atggctctgaaccacaggggtggccactccgcttggcgccggccagaggtctggctcttg
gtgtggaatgccctgtgccagctgggtgcccgcggctgccctgctctctgcacctgcaca
gggacgactgtggattgccatggcatggggctcagagccgtgcccaaaaacatcccgcgc
aacactgagagactggaactcaacgggaacaacatcactcggatccacaagaatgacttt
gcaggactgaagcagcttcgagtgttacaactgatggaaaatcagattggagcagtggag
cgaggagcttttgatgacatgagggatctggagcgactacgactgaaccggaaccatctg
cacttgttaccagaactactgttccagaataaccaggcactttcaagactggatctgagt
gagaatgccatccaggccatccccaggaaagcattccgtggagccactgacctaaaaaac
ctacagctggataagaaccagataagctgtattgaagatggggcttttagagctctccgg
ggcctagaagtattgacactgaataacaacaacatcactactatccccgtctccagcttc
aaccacatgcccaagctccgaactttccgtttacactccaaccaccttttctgtgattgc
cacttggcctggctctctcagtggctaaggcaacgtcctaccattgggctcttcacacag
tgttcaggacctgcctccctgcgaagtctcaatgtggctgaggtccagaagagcgagttc
agctgctcaggacaaggggaggccacccggtcccctgtgtgcaccctgtccttaggatcc
tgcccacccatgtgtgcctgcagcaatgggatcgtggactgccgtggcaaaggactcacc
gctattccggccaacctgcctgagaccatgacagagatccgactggagctcaatggcatc
aaatcaataccccccggagccttttctccctacagaaagctaaggaggatagacctgagc
aataaccagatatctgagattgctcctgatgcattccagggtctccgttccttgaactct
cttgttctttatggaaacaagatcacagacctgcccaagggagtgtttggagggctctac
accctgcaattgctccttcttaatgccaacaagatcaactgcatccgagctgatgccttc
caagatctccagaacctgtccctgctctcactatatgacaacaagatccagagcctggct
aaggggaccttcacctccctccgagccatccagaccctgcacctggctcaaaatccgttc
atctgtgactgtaatctgaagtggctggcagatttcttacgcactaaccccatcgagacc
agtggagcccgctgcgccagtccccgccgcctggccaacaagcgcattgggcagatcaaa
agcaagaaattcaggtgctcagcaaaagagcagtacttccttccaggcacagaggattac
cggttgaacagcgagtgcaacagtgatgccgtctgtccccacaagtgccgctgcgaatcc
aatgtggtagaatgctccaatctgaaactcaccaagatcccagagcgcatcccccagtcc
accgcagagctacggttgaacaacaatgaaatctcaatattagaggccactggaattttt
aaaaaacttccacatctgaagaaaatcaacctcagcaacaacaaggtatcagagatagaa
gatggtgccttcgagggggcagcctcagtgagtgagttgcacctgactgtcaaccagttg
gaatccatacgaagcggcatgttccggggtttggatggtctaaggaccctaatgctgagg
aacaaccgcatcagctgcatccacaacgacagcttcacaggccttcggaatgtccgcctc
ctctctctttatgacaaccagatcagcaccatctcgcctggagcctttgacaccctccag
tccctctccactctgaatctcctggctaatccattcaactgtaactgccagctggcctgg
ctcggggactggctccggaagaggaagatcgtgacggggaacccccggtgtcagaaccca
gacttcttacggcagatcccactccaggacgtggccttccccgacttcaggtgtgaggaa
ggtcaggaggaaggaggctgcttcccacggccacagtgcccacaggaatgcacctgcctt
gacactgtggttcgctgcagcaacaagcaccttcggggtctccccaagggcatccccaag
aatgtcactgaactctacctggatggtaaccagttcactctggtccctgcccagctctcc
accttcaaatatctgcagctcgtggacttgagcaacaataaaatcggctccttgagtaat
tcctccttcaccaacatgagccagctcactaccctgattctcagctacaattctcttcag
tgcatcccaccactggcttttgagggtctccgttctctccggctgctgtctctccatggc
aatgacatctccactctccgtgagggcatcttcactgatgtgacttccctatctcatctg
gccattggagccaatcctctctactgcaactgccaccttcgctggctctccagttgggtc
aaaacgggttacaaggaacctggcattgcccgatgtgctggaccccctgacatggaaggc
aagctgctcctcacgactcctgccaagaagtttgaatgccaaggccctccctccataact
gtgcaagccaaatgtaacccctgcctatccaacccatgtcagaaccagggaacctgtcag
aacgaccctctggactcctatagatgtacctgccccagtggctacaagggcagagactgt
gaaatgtcactcaacagttgctccagtggcccctgtgaaaatggcggaacctgtcactcc
tcccaagcaggagagggctccgggttcacgtgttcctgcccagtgggatttgagggccca
acctgtggggtgaacacagacaactgcagagatcatgcctgtgagaatgggggcatctgt
gtggatggcatcaacaactacacatgtttatgcccctttcaatacacaggaagagtctgt
gagcagctggtggacttctgttctctaaatttaaacccatgtcaacatggtgccaaatgt
gttggtactccggaagggcccaagtgtgaatgtactccaggctatgtgggtgacaactgc
agcataaactacaatgactgcatagatcatcaatgccagaatggtgcccattgtgtagat
gaagtgaatggttactcttgcctttgtgaagaaggatatagtgggcagctgtgtgagatg
gcctcccagccccccaaacccctgagcccctgcgagggaaccgaatgccagaatggggcc
aactgtgtggacctcggtaacaggcctgtgtgtcagtgtctgccaggctttggtggccct
gagtgtgagaagctgctgagcgtcaactttgtggacaaagacacgtatctgcagttcact
gacctgcagaactggccccgggcgaacatcaccctgcaggtcgccacagcagaagacaac
ggaatactgctgtacaatggtgacaatgaccacatcgcagtggagctgtaccaagggcac
gtgagggtcagctacgatccaggcagctaccccagctcggctatctacagcgccgagacc
atcaatgatggccagttccacacagtcgaacttgtcacctttgaccagatggtgaatctc
tccatcgatggcggcagccccatgaccatggacaactttggcaaacactataccctcaac
agcgaagccccgctctacgtgggagggatgcctgtggacgtgaactcggcggccttccgg
ctgtggcagatcctcaacggcaccagcttccatggctgcatccgcaacctgtacatcaac
aacgagctgcaggacttcaccaagacgcagatgcagccgggcgtggtgccgggctgtgag
ccctgccggaagctctactgtctgcacggcatctgccagcccaacgctgcccacgggccc
gtctgccactgcgagcccggctgggggggaccccactgcgaccagcaggtcggcaacccc
tgccaggggcacaagtgcgtgcatgggacctgcttgcccctggacgctctgtcctacagt
tgccagtgccaagatgggtacacaggagctctgtgcaaccagccaggggagccaccagat
ccctgtgagaaccttcattgtctacatgggcactgccagatttccaccgagggggccgcg
cactgtgtgtgcgacagtggctttgctggggagctgtgtgagcaagagtccaagtgccag
ggggaccctgttcgggatttccatcaggtccagaggggctatgccatctgccagaccacc
cgcccgctgtcctgggtcgagtgtcggggctcctgcccgggccagggctgctgcacaggg
ctgcggatgaaacggaggagattcacctttgagtgcagcgatggttcctcatttgtggag
gaggtggaaaaggccatcaagtgtggctgcgctagctgcatgtag
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integrated database retrieval system
