Sarcophilus harrisii (Tasmanian devil): 100931784
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Entry
100931784 CDS
T02286
Symbol
SLIT1
Name
(RefSeq) slit homolog 1 protein isoform X1
KO
K06838
slit 1
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100931784 (SLIT1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
shr00536
]
100931784 (SLIT1)
Glycosaminoglycan binding proteins [BR:
shr00536
]
Heparan sulfate / Heparin
Axon guidance molecules
100931784 (SLIT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_2
hEGF
Laminin_G_1
LRRNT
LRRCT
LRR_1
LRR_9
EGF_TEN
LRR_14
EGF_DL_JAG
EGF_Teneurin
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
100931784
NCBI-ProteinID:
XP_031812046
Ensembl:
ENSSHAG00000018586
UniProt:
G3X2Q4
LinkDB
All DBs
Position
2:complement(590431666..590677474)
Genome browser
AA seq
1534 aa
AA seq
DB search
MALNHRGGHSAWRRPEVWLLVWNALCQLGARGCPALCTCTGTTVDCHGMGLRAVPKNIPR
NTERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMRDLERLRLNRNHL
HLLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEDGAFRALR
GLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQ
CSGPASLRSLNVAEVQKSEFSCSGQGEATRSPVCTLSLGSCPPMCACSNGIVDCRGKGLT
AIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQISEIAPDAFQGLRSLNS
LVLYGNKITDLPKGVFGGLYTLQLLLLNANKINCIRADAFQDLQNLSLLSLYDNKIQSLA
KGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPRRLANKRIGQIK
SKKFRCSAKEQYFLPGTEDYRLNSECNSDAVCPHKCRCESNVVECSNLKLTKIPERIPQS
TAELRLNNNEISILEATGIFKKLPHLKKINLSNNKVSEIEDGAFEGAASVSELHLTVNQL
ESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQISTISPGAFDTLQ
SLSTLNLLANPFNCNCQLAWLGDWLRKRKIVTGNPRCQNPDFLRQIPLQDVAFPDFRCEE
GQEEGGCFPRPQCPQECTCLDTVVRCSNKHLRGLPKGIPKNVTELYLDGNQFTLVPAQLS
TFKYLQLVDLSNNKIGSLSNSSFTNMSQLTTLILSYNSLQCIPPLAFEGLRSLRLLSLHG
NDISTLREGIFTDVTSLSHLAIGANPLYCNCHLRWLSSWVKTGYKEPGIARCAGPPDMEG
KLLLTTPAKKFECQGPPSITVQAKCNPCLSNPCQNQGTCQNDPLDSYRCTCPSGYKGRDC
EMSLNSCSSGPCENGGTCHSSQAGEGSGFTCSCPVGFEGPTCGVNTDNCRDHACENGGIC
VDGINNYTCLCPFQYTGRVCEQLVDFCSLNLNPCQHGAKCVGTPEGPKCECTPGYVGDNC
SINYNDCIDHQCQNGAHCVDEVNGYSCLCEEGYSGQLCEMASQPPKPLSPCEGTECQNGA
NCVDLGNRPVCQCLPGFGGPECEKLLSVNFVDKDTYLQFTDLQNWPRANITLQVATAEDN
GILLYNGDNDHIAVELYQGHVRVSYDPGSYPSSAIYSAETINDGQFHTVELVTFDQMVNL
SIDGGSPMTMDNFGKHYTLNSEAPLYVGGMPVDVNSAAFRLWQILNGTSFHGCIRNLYIN
NELQDFTKTQMQPGVVPGCEPCRKLYCLHGICQPNAAHGPVCHCEPGWGGPHCDQQVGNP
CQGHKCVHGTCLPLDALSYSCQCQDGYTGALCNQPGEPPDPCENLHCLHGHCQISTEGAA
HCVCDSGFAGELCEQESKCQGDPVRDFHQVQRGYAICQTTRPLSWVECRGSCPGQGCCTG
LRMKRRRFTFECSDGSSFVEEVEKAIKCGCASCM
NT seq
4605 nt
NT seq
+upstream
nt +downstream
nt
atggctctgaaccacaggggtggccactccgcttggcgccggccagaggtctggctcttg
gtgtggaatgccctgtgccagctgggtgcccgcggctgccctgctctctgcacctgcaca
gggacgactgtggattgccatggcatggggctcagagccgtgcccaaaaacatcccgcgc
aacactgagagactggaactcaacgggaacaacatcactcggatccacaagaatgacttt
gcaggactgaagcagcttcgagtgttacaactgatggaaaatcagattggagcagtggag
cgaggagcttttgatgacatgagggatctggagcgactacgactgaaccggaaccatctg
cacttgttaccagaactactgttccagaataaccaggcactttcaagactggatctgagt
gagaatgccatccaggccatccccaggaaagcattccgtggagccactgacctaaaaaac
ctacagctggataagaaccagataagctgtattgaagatggggcttttagagctctccgg
ggcctagaagtattgacactgaataacaacaacatcactactatccccgtctccagcttc
aaccacatgcccaagctccgaactttccgtttacactccaaccaccttttctgtgattgc
cacttggcctggctctctcagtggctaaggcaacgtcctaccattgggctcttcacacag
tgttcaggacctgcctccctgcgaagtctcaatgtggctgaggtccagaagagcgagttc
agctgctcaggacaaggggaggccacccggtcccctgtgtgcaccctgtccttaggatcc
tgcccacccatgtgtgcctgcagcaatgggatcgtggactgccgtggcaaaggactcacc
gctattccggccaacctgcctgagaccatgacagagatccgactggagctcaatggcatc
aaatcaataccccccggagccttttctccctacagaaagctaaggaggatagacctgagc
aataaccagatatctgagattgctcctgatgcattccagggtctccgttccttgaactct
cttgttctttatggaaacaagatcacagacctgcccaagggagtgtttggagggctctac
accctgcaattgctccttcttaatgccaacaagatcaactgcatccgagctgatgccttc
caagatctccagaacctgtccctgctctcactatatgacaacaagatccagagcctggct
aaggggaccttcacctccctccgagccatccagaccctgcacctggctcaaaatccgttc
atctgtgactgtaatctgaagtggctggcagatttcttacgcactaaccccatcgagacc
agtggagcccgctgcgccagtccccgccgcctggccaacaagcgcattgggcagatcaaa
agcaagaaattcaggtgctcagcaaaagagcagtacttccttccaggcacagaggattac
cggttgaacagcgagtgcaacagtgatgccgtctgtccccacaagtgccgctgcgaatcc
aatgtggtagaatgctccaatctgaaactcaccaagatcccagagcgcatcccccagtcc
accgcagagctacggttgaacaacaatgaaatctcaatattagaggccactggaattttt
aaaaaacttccacatctgaagaaaatcaacctcagcaacaacaaggtatcagagatagaa
gatggtgccttcgagggggcagcctcagtgagtgagttgcacctgactgtcaaccagttg
gaatccatacgaagcggcatgttccggggtttggatggtctaaggaccctaatgctgagg
aacaaccgcatcagctgcatccacaacgacagcttcacaggccttcggaatgtccgcctc
ctctctctttatgacaaccagatcagcaccatctcgcctggagcctttgacaccctccag
tccctctccactctgaatctcctggctaatccattcaactgtaactgccagctggcctgg
ctcggggactggctccggaagaggaagatcgtgacggggaacccccggtgtcagaaccca
gacttcttacggcagatcccactccaggacgtggccttccccgacttcaggtgtgaggaa
ggtcaggaggaaggaggctgcttcccacggccacagtgcccacaggaatgcacctgcctt
gacactgtggttcgctgcagcaacaagcaccttcggggtctccccaagggcatccccaag
aatgtcactgaactctacctggatggtaaccagttcactctggtccctgcccagctctcc
accttcaaatatctgcagctcgtggacttgagcaacaataaaatcggctccttgagtaat
tcctccttcaccaacatgagccagctcactaccctgattctcagctacaattctcttcag
tgcatcccaccactggcttttgagggtctccgttctctccggctgctgtctctccatggc
aatgacatctccactctccgtgagggcatcttcactgatgtgacttccctatctcatctg
gccattggagccaatcctctctactgcaactgccaccttcgctggctctccagttgggtc
aaaacgggttacaaggaacctggcattgcccgatgtgctggaccccctgacatggaaggc
aagctgctcctcacgactcctgccaagaagtttgaatgccaaggccctccctccataact
gtgcaagccaaatgtaacccctgcctatccaacccatgtcagaaccagggaacctgtcag
aacgaccctctggactcctatagatgtacctgccccagtggctacaagggcagagactgt
gaaatgtcactcaacagttgctccagtggcccctgtgaaaatggcggaacctgtcactcc
tcccaagcaggagagggctccgggttcacgtgttcctgcccagtgggatttgagggccca
acctgtggggtgaacacagacaactgcagagatcatgcctgtgagaatgggggcatctgt
gtggatggcatcaacaactacacatgtttatgcccctttcaatacacaggaagagtctgt
gagcagctggtggacttctgttctctaaatttaaacccatgtcaacatggtgccaaatgt
gttggtactccggaagggcccaagtgtgaatgtactccaggctatgtgggtgacaactgc
agcataaactacaatgactgcatagatcatcaatgccagaatggtgcccattgtgtagat
gaagtgaatggttactcttgcctttgtgaagaaggatatagtgggcagctgtgtgagatg
gcctcccagccccccaaacccctgagcccctgcgagggaaccgaatgccagaatggggcc
aactgtgtggacctcggtaacaggcctgtgtgtcagtgtctgccaggctttggtggccct
gagtgtgagaagctgctgagcgtcaactttgtggacaaagacacgtatctgcagttcact
gacctgcagaactggccccgggcgaacatcaccctgcaggtcgccacagcagaagacaac
ggaatactgctgtacaatggtgacaatgaccacatcgcagtggagctgtaccaagggcac
gtgagggtcagctacgatccaggcagctaccccagctcggctatctacagcgccgagacc
atcaatgatggccagttccacacagtcgaacttgtcacctttgaccagatggtgaatctc
tccatcgatggcggcagccccatgaccatggacaactttggcaaacactataccctcaac
agcgaagccccgctctacgtgggagggatgcctgtggacgtgaactcggcggccttccgg
ctgtggcagatcctcaacggcaccagcttccatggctgcatccgcaacctgtacatcaac
aacgagctgcaggacttcaccaagacgcagatgcagccgggcgtggtgccgggctgtgag
ccctgccggaagctctactgtctgcacggcatctgccagcccaacgctgcccacgggccc
gtctgccactgcgagcccggctgggggggaccccactgcgaccagcaggtcggcaacccc
tgccaggggcacaagtgcgtgcatgggacctgcttgcccctggacgctctgtcctacagt
tgccagtgccaagatgggtacacaggagctctgtgcaaccagccaggggagccaccagat
ccctgtgagaaccttcattgtctacatgggcactgccagatttccaccgagggggccgcg
cactgtgtgtgcgacagtggctttgctggggagctgtgtgagcaagagtccaagtgccag
ggggaccctgttcgggatttccatcaggtccagaggggctatgccatctgccagaccacc
cgcccgctgtcctgggtcgagtgtcggggctcctgcccgggccagggctgctgcacaggg
ctgcggatgaaacggaggagattcacctttgagtgcagcgatggttcctcatttgtggag
gaggtggaaaaggccatcaagtgtggctgcgctagctgcatgtag
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integrated database retrieval system
